Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2413 ATGTCACCGTTTTCGCTCTTCCTCCTCACCACGCTTTCCCTCTTTTGCTTCTTTGCTAATGCGCGACTCACCTTGGACTTCTACAAGGACACGTGTCCGCAGTTCAGCCAGATCATCCGGGACACCGTGACCTCCAAGCAGATCGCGAGCCCCACGACGGCGCCCGCCACGCTCCGCCTCTTCCTCCACGACTGCCTCCTGCCCAACGGCTGCGACGCCTCCATCCTCCTCTCCTCCACGGCCTTCAACACCGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTGGTGGTCCGCGCCAAGACCGCCCTCGAGCTCGCCTGCCCCAACACGGTCTCCTGCGCCGACATCCTCTCCGTCGCCACCCGCGACCTGCTCACCATGCTCGGCGGCCCCTTCTACCCCGTCTTCCTTGGCCGCCGCGACGGCCGCTCCTCCCGCGCCGCCGACGTCGCCCCCCACCTCCCCACGCCCTCCATGCCCGTCCCCCAAATAGCCCAGCTCTTCACCCAACGCGGCTTCTCCGTCGAGGAATTCGTCGCTCTCAGTGGGGCCCACACCGTCGGGTTCTCCCACTGCTCCCAGTTCATCTCCAACGTTTACAACACctcatcctcttcttcttcttccgaATACAACCCTCGCTTCGCTCAGGGGCTGCAAAAGGCTTGTGCGGATTACCACAATAACCCCACTTTGTCGGTGTTTAATGACATTATGACACCCAACAAGTTCGACAATGTGTACTTCCAGAACCTTCCGAAGGGGTTGGGTGTGTTGAAGTCTGATCACGGGTTGTACGGTGACCCTCTTACGAGACCCTTTGTGGAGAGTTTTGCGAAGGACCAAAACAGGTTCTTTCAGGTGTTTGCTAGGGCCATGCAGAAGCTGAGCCTCTTGGGGGTGCAAACGGGGAGGAAAGGAGAGATCAGGCGCAGTGTGGCACCAGTTTTGTCCCTTATGGGGGTCTTGGTAACAGCTGGTTTTAAGGACCATGCACCATGCTGCATGCATGTGCATACATACGCGCATTTTATTACACGGCTGCAGTTGTTGCGGCGTTTTTAA 1086 0.582 MSPFSLFLLTTLSLFCFFANARLTLDFYKDTCPQFSQIIRDTVTSKQIASPTTAPATLRLFLHDCLLPNGCDASILLSSTAFNTAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSVATRDLLTMLGGPFYPVFLGRRDGRSSRAADVAPHLPTPSMPVPQIAQLFTQRGFSVEEFVALSGAHTVGFSHCSQFISNVYNTSSSSSSSEYNPRFAQGLQKACADYHNNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLYGDPLTRPFVESFAKDQNRFFQVFARAMQKLSLLGVQTGRKGEIRRSVAPVLSLMGVLVTAGFKDHAPCCMHVHTYAHFITRLQLLRRF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2413 361 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PANTHER - 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 CDD secretory_peroxidase 23 319 IPR033905 GO:0004601|GO:0042744
Ssu8g2413 361 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g2413 361 PANTHER PEROXIDASE 31 6 321 - -
Ssu8g2413 361 Gene3D - 26 319 - -
Ssu8g2413 361 Gene3D Peroxidase, domain 2 162 303 - -
Ssu8g2413 361 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2413 Ssu-Chr8 62859602 62861791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2413 19 318 Peroxidase AT3G28200 66.000 3.46e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2413 K00430 - gmx:100817030 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2413 8 62859602 62861791 Ssu8g2413 8 62859602 62861791 ECH