Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2352 ATGGATTTTAAGAGAGTGAGTTACTTGGTTGggtgttttgtttttggtttggtAGGTTTATTCACAGGAGTAAAGGGAGAGGATGTTTTGCATAAATCCAAAGAATATTCAGCAATTTACAACTTTGGGGACTCAAATTCAGACACGGGAACCTTTTCCGCAGCATTTACAATGGTTTATCCTCCCAATGGTGAAAGCTTTCCTGGAAATCTCCCTACAAGGAATTGTGATGGCCGTCTCATCATAGATTTCGTCACTGAAGAGTTGAAGCTGCCATACTTGAGTGCATATTTGGACTCCATTGGTTCAAATTACAATTATGGGGCAAACTTTGCAGCGGGTGGTTCATCCATACGACAAACCAACTTTAGTCCAATCTCCTTTGGGCTTCAAATATCTCAATTCACACACTTCAAGTCCAGGACAAGGGCTTCCTATAATCAAAGCTCTCACAGCAGTTACAGGCTACCCAAGTCCATGGACTTCTCCAATGCCCTATACACCATAGATATTGGTCAGAACGATCTAAGCTTTGGTTTCATGACCTCAGATCCACAATCAGTCATATCAACAATCCCTGATATATTGAGCCAATTCTCTCTAGGATTGCAACAACTTTACAATGAAGGGGCTAGACTCTTTTGGATACATAATACAGGCCCAATTGGATGTTTGCCACGAACAAGTATGAAGAGCAAGCCCAGACCTGAAGACTTGGATTATACTGGATGTAGAAAAATCGAGAATGAGATTGCTCAGGAGTTTAATAAGCAGCTTAAGGACATTGTGTTTGAGACAAGGAAAGAGTTACCCACTGCCAAGTTCACCTATGTTGATGTCTACTCAGCCAAAtatgaactaataaaaaatgcaaGGAATCAAGGTTTCGTTAATCCAAAGAAATTCTGCTGTGGCACAACCAATGTTGTCCATATTGAttgtggaaaaaagaaaattaaaaatggaaaagaagaaTACTACAAATGCAAACATCCATCAAAGTACATTAACTGGGACGGTGTGCACTACTCTGAAGCAGCAAACCGGTGGCTTGCCCTGCTCATTTTAAATGGCTCGTTCTCTGATCCACCAGTTCCTATAGGGATGGTTGGTAATTAA 1119 0.387 MDFKRVSYLVGCFVFGLVGLFTGVKGEDVLHKSKEYSAIYNFGDSNSDTGTFSAAFTMVYPPNGESFPGNLPTRNCDGRLIIDFVTEELKLPYLSAYLDSIGSNYNYGANFAAGGSSIRQTNFSPISFGLQISQFTHFKSRTRASYNQSSHSSYRLPKSMDFSNALYTIDIGQNDLSFGFMTSDPQSVISTIPDILSQFSLGLQQLYNEGARLFWIHNTGPIGCLPRTSMKSKPRPEDLDYTGCRKIENEIAQEFNKQLKDIVFETRKELPTAKFTYVDVYSAKYELIKNARNQGFVNPKKFCCGTTNVVHIDCGKKKIKNGKEEYYKCKHPSKYINWDGVHYSEAANRWLALLILNGSFSDPPVPIGMVGN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2352 372 Pfam GDSL-like Lipase/Acylhydrolase 39 354 IPR001087 GO:0016788
Ssu8g2352 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN ISOFORM 1 27 367 - -
Ssu8g2352 372 SUPERFAMILY SGNH hydrolase 109 356 - -
Ssu8g2352 372 Gene3D SGNH hydrolase 25 359 IPR036514 -
Ssu8g2352 372 CDD SGNH_plant_lipase_like 38 359 IPR035669 -
Ssu8g2352 372 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 27 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2352 Ssu-Chr8 61572028 61576252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2352 17 347 Pollen Coat Proteome AT1G75930 27.874 4.72e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2352 - - vra:106755556 531.561