Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2349 ATGAAAGAGTTCATGCGTCTGTTTGGGGTATTCACGGTGGGAGATGCTGTTCCTTATTTGAGATGGTTTGATTTTGGTGGCCATGAGAAGGCCATGAAAGAAACTGCCAAGGAATTTGACCAGATTTTAGGAGAGTGGTTACAGGAGCACAGACAAAACAGGGCTTTGGATGAGAATGTTGATGGGGTTCAAGACTTCATGGACGTGATGATTTCCTTGCTTGATGGAAAAACAATTGATGGAATCGATGCCGATACCGTGATCAAAGCCACCGTACTGaCAGTAATTGCAGCAGGAACTGACACAAGCAATACTGCTTTAACATGGGCAATgtgtttaatattgaaaaatcctCTTGTATTGGAAAAAGTTATGGCAGAACTTGACATCCAAGTTGGAAAAGAGAGATGCATGAGTGAGTCTAATATTAGTAAGTTAATATACCTTCAAGCCATAGTCTAA 462 0.3961 MKEFMRLFGVFTVGDAVPYLRWFDFGGHEKAMKETAKEFDQILGEWLQEHRQNRALDENVDGVQDFMDVMISLLDGKTIDGIDADTVIKATVLTVIAAGTDTSNTALTWAMCLILKNPLVLEKVMAELDIQVGKERCMSESNISKLIYLQAIV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2349 153 PANTHER CYTOCHROME P450 82C3-RELATED 1 153 - -
Ssu8g2349 153 PRINTS E-class P450 group I signature 107 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2349 153 PRINTS E-class P450 group I signature 87 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2349 153 SUPERFAMILY Cytochrome P450 2 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2349 153 Gene3D Cytochrome P450 1 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2349 153 PANTHER CYTOCHROME P450 82A2 1 153 - -
Ssu8g2349 153 Pfam Cytochrome P450 10 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2349 Ssu-Chr8 61483896 61486006 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2349 3 153 Cytochrome P450 AT4G31950 45.752 2.67e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2349 - - gmx:100805047 254.988