Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2346 ATGGTCATTGGGAAGAGATATTTCAGTGCTACAACTGTGGATGACGAGAAGGCAGAGAGAGGTGTAAAAGCTGTGAAGGATTTTTTGCGTCTGTTTGGGGTATTCGCGGTGGGAGATGCTATTCCTTATTTGAGATGCTTTGATTTTGGTGGCCATGAAAAGGCCATGAAAGAAACTGCCAAGGAATTTGACGAGATTTTAGGTGAGTGGCTAGAGGAGCACAGACAAAACAGGGCTTTGGATGAGAATGTTGATCGAGTTCAAGACTTCATGGACGTGATGATTTCCTTGCTTGATGGAAAAACAATTGATGGGATCGACGCCGATACCATGATCAAATCCACTGTACTGACAATAATTGCTGGAGGAGCTGACACAAGCAGTACTACTCTTACATGGGCAATATGTTTGATATTGAGAAATCCTCttgttttagaaaaagttaAAGTAGAACTTGATATTCAAGTTGGAAAAGAGAGAAGCATAAGTGAGGCTGATATTGGTAAGTTAATATATGTTCAAACCATAGTCAAAGAAACTTTAAGATTGTACCCTCCAAGTCCTCTCTTCCCACCTCGTGAATTCACAGAAAATTGCATTTTAAGTGGTTACAATGTCAAAAAGGGAACCCgtctaattacaaatatttggAAAATCCACACAGATCTTAATCTTTGGTCAAATCCATTAGAGTTCAAACCGGAAAGGTTTCTTACCACTCACAAAAATATTGACGTTACCGGTCATCATTTTGAGCTATTACCATTTGGAGGTGGTAGAAGGATTTGTCCTGGAATATCCTTTGGCCTTCAAACGATTCATTTAACTCTTGCTAGTCTTTTGCATTCCTTTGAAATCTTATATCCATCAACTGAACCTCTTGATATGACTGAAACCTTTGGATTGACCAACACTAAAGCCACTCCACTTGTGGTTCTTATTAAACCTAATTTATCTCCTAGTTATTACGAAAGCATGTGA 981 0.3792 MVIGKRYFSATTVDDEKAERGVKAVKDFLRLFGVFAVGDAIPYLRCFDFGGHEKAMKETAKEFDEILGEWLEEHRQNRALDENVDRVQDFMDVMISLLDGKTIDGIDADTMIKSTVLTIIAGGADTSSTTLTWAICLILRNPLVLEKVKVELDIQVGKERSISEADIGKLIYVQTIVKETLRLYPPSPLFPPREFTENCILSGYNVKKGTRLITNIWKIHTDLNLWSNPLEFKPERFLTTHKNIDVTGHHFELLPFGGGRRICPGISFGLQTIHLTLASLLHSFEILYPSTEPLDMTETFGLTNTKATPLVVLIKPNLSPSYYESM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2346 326 PRINTS E-class P450 group I signature 215 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS E-class P450 group I signature 131 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS E-class P450 group I signature 263 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS E-class P450 group I signature 253 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS E-class P450 group I signature 111 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 Gene3D Cytochrome P450 1 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PANTHER CYTOCHROME P450 82C3-RELATED 1 324 - -
Ssu8g2346 326 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 256 265 IPR017972 GO:0005506|GO:0016705
Ssu8g2346 326 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS P450 superfamily signature 122 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PRINTS P450 superfamily signature 254 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 Pfam Cytochrome P450 2 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 SUPERFAMILY Cytochrome P450 14 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2346 326 PANTHER CYTOCHROME P450 82A2 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2346 Ssu-Chr8 61361845 61364590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2346 1 323 Cytochrome P450 AT4G31940 49.394 1.25e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2346 - - gmx:100805047 551.206