Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2345 ATGCTACCGACTCCAGAGGCTTCTGTCTTGTTTTCATCACTTGGAGCAGCAGCGCTAGCGGCAAACAATTACAAAACTGAGCAGCCAAGTttgaaaaagGAATTGATTTTGGGCGGAACTGATACTACTGCTGTTACTCTTACATGGGcaatttgtttattattgcGAAATCCTCTTGTATTGGCAAAGgctaaagaagaaattaatatgCAAATTGGCAAAGATAGATACATAAGTGAGTTAGATACAAATAAACTTGTGTATCTTCAAGCTATAGTTAAAGAGACACTAAGATTGTATCCACCAGCGCCTCTTTCATCACCTCGTGAATTTACAGAGAATTGCATCTTGGGTAGCTACCACATAAAAAAGGGAACTCGACTTATCCCAAACTTGTGGAAGATCCACAGAGACCCTAGTGTTTGGTCAGATCCATTAGAATTCAAACCAGAAAGGTTCCTTACCACTCACAAAGATGTTGATGTTAGGGGTCACCATTTTGAGTTGTTACCATTTGGAAGTGGGAGAAGAATTTGTGCTGGAATGTCCCTTGGCTTACATATGGTCCATTTCACTTTGGCAAATTTCTTGCATTCCTTTGACATCTTGGATCCAGCGGCTGAACCTATTGATATGACTGAAATTTTTGGATTTACCAACACCAAAGCTATTCCACTTGAGATTTTGGTTAAACCACGAATTGACACAAGTAGTGCTACTCTTACATGGGCAATATGCTTGATATTGGGAAATCCTCTTGTATTAGAAAAAGTTAAAGCAGAACTTGACATCCAAGTTGGAAAAGAAAGATACATAAATGAGTCTGATATAAGTAACTTAATATACCTTCAAGCTATAGTCAAAGAAACTTTAAGATTGTACCCTACAGCTCCTCTCTCAGCACCTCGTGAATTCATAGAGGATTGCACTTTAGGTAGCTACAATGTCAAAAAGGGAACGCGTCTAATTACAAATCTTTGGAAGATCCACACAGATTTTAAGGTTTGGCCAGATCCATTGGAGTTTAAACCAGAAAGGTTTCTTACCACTCACAAAGATATTGACATTAGGGGTCATCATTTTGAGCTATTAACATTTGGAAATGGTAGAAGGTTTTTTCATTTCCATTTGACTCTTTCAAAAGGTGTAAACGTCACTACCGATACCAATTGCAGAGGCGTTTTTGTCTTGTTTTCATCACATGTGGCGCTAGCACTAGGATCTTACCTTGCTGGTCAAGTATCCTTGGTCACCAAgGAATTGATTTTGGGCGGAACTGATTCAACTGCTGTTACTCTTACATGGGCAATTTGTTTGCTATTGCGAAGTCCTCTTGTATTGGAAAAGGCTAAAGAAGAAATTGGTACGCAAATTGGAAAAGATGGGTATATAAGTGAGTCAGATATAAGTAAACTTGTGTATCTTCAAGCTATAGTTAAAGAGACACTAAGATTGTATCCACCAGCGCCTCTTTCATCACCTCGTGAATTCACAGAAAATTGCATCTTAGGTGGCTACCATGTCAAAAAGGAAACTCGATTTATCCCAAACTTGTGGAAGATCCACAGAGACCCTAGTGTTTGGTCAGATCCATTAGAATTCAAACCAGAAAGGTTCCTTACCACTCACAAAGATGTTGATGTTAGGGGTCACCATTTTGAGTTGTTACCGTTTGGAAGTGGGAGAAGAATTTGTGCTGGAATGTCCCTTGGCTTACGTATGGTCCATTTCACTTTGGCTAATTTATTGCATTCCTTTGACATCTTGAATCCATCGGCTGAACCCATTGATATGACAGAAATCTTTGGATTTACCAACACCAAAGCTACTCCACTTGAGATTTTGGTTAAACCACGTTTGTCTCCCAGCTTTTATGAAACTTTTTAA 1887 0.3826 MLPTPEASVLFSSLGAAALAANNYKTEQPSLKKELILGGTDTTAVTLTWAICLLLRNPLVLAKAKEEINMQIGKDRYISELDTNKLVYLQAIVKETLRLYPPAPLSSPREFTENCILGSYHIKKGTRLIPNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDVRGHHFELLPFGSGRRICAGMSLGLHMVHFTLANFLHSFDILDPAAEPIDMTEIFGFTNTKAIPLEILVKPRIDTSSATLTWAICLILGNPLVLEKVKAELDIQVGKERYINESDISNLIYLQAIVKETLRLYPTAPLSAPREFIEDCTLGSYNVKKGTRLITNLWKIHTDFKVWPDPLEFKPERFLTTHKDIDIRGHHFELLTFGNGRRFFHFHLTLSKGVNVTTDTNCRGVFVLFSSHVALALGSYLAGQVSLVTKELILGGTDSTAVTLTWAICLLLRSPLVLEKAKEEIGTQIGKDGYISESDISKLVYLQAIVKETLRLYPPAPLSSPREFTENCILGGYHVKKETRFIPNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDVRGHHFELLPFGSGRRICAGMSLGLRMVHFTLANLLHSFDILNPSAEPIDMTEIFGFTNTKATPLEILVKPRLSPSFYETF 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2345 628 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 558 567 IPR017972 GO:0005506|GO:0016705
Ssu8g2345 628 Gene3D Cytochrome P450 30 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 Gene3D Cytochrome P450 412 621 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 SUPERFAMILY Cytochrome P450 34 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 Gene3D Cytochrome P450 234 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 SUPERFAMILY Cytochrome P450 418 619 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS P450 superfamily signature 565 576 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS P450 superfamily signature 38 55 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS P450 superfamily signature 556 565 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PANTHER CYTOCHROME P450 82A3 23 234 - -
Ssu8g2345 628 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 172 181 IPR017972 GO:0005506|GO:0016705
Ssu8g2345 628 PANTHER CYTOCHROME P450 82C3-RELATED 23 234 - -
Ssu8g2345 628 PANTHER CYTOCHROME P450 82C3-RELATED 417 627 - -
Ssu8g2345 628 PANTHER CYTOCHROME P450 82C3-RELATED 235 372 - -
Ssu8g2345 628 SUPERFAMILY Cytochrome P450 235 381 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PANTHER CYTOCHROME P450 82A3 417 627 - -
Ssu8g2345 628 PANTHER CYTOCHROME P450 82A3 235 372 - -
Ssu8g2345 628 PRINTS E-class P450 group I signature 433 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS E-class P450 group I signature 476 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS E-class P450 group I signature 565 588 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS E-class P450 group I signature 517 541 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS E-class P450 group I signature 413 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 PRINTS E-class P450 group I signature 555 565 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 Pfam Cytochrome P450 34 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 Pfam Cytochrome P450 418 600 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2345 628 Pfam Cytochrome P450 235 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2345 Ssu-Chr8 61208913 61224610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2345 421 625 Cytochrome P450 AT4G31940 54.369 9.68e-71 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2345 - K23179 gmx:100789386 385.956