Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g2331 | ATGGAGGCTATGCTGAAATTGTCTAGTCTTTGTGGTCAAGAGATAGGAGTTAAGAGAGGTGCTTCCATTTGGTCAGAAGAGGACTTCTTTATTGAAAAGGGTAGCAAGGAAGATAAACTTGAATCTGCTAAAGCTGAGATGGGTAAGGTGAAAGAAGAAAACGAAAGACTGAAGATGATGctagaaaaagtagaaaaggaTTATCACTCTCTTCAGCTTCGTTTCTTTGACATCCTTCATAGAGAAGCATTCAAGAAAGGGGTGGAAGATTCAGCTGCTTCCCCTGATGAAGAGGAGGAACCTAAGCTTGTGTCACTTTGTCTTGGAAGAAGTCCAAGGGAGCCTAAAAAGGATGGAATAATTGGTAACTCAAGCAAGcctaaagaaaatgaagatttgGAAGCCAGCCTTACCCTTGGTTTAGACTCCAAAAGTGTGTCTTCAAAGGAGCAGGTATCTGCTATGAGCCCCATGAACACCTCAGAAGaactaaaggaaaaaaattcaacaaataaatcaGAAAGGACCAAAGATGGAGGGGATGAAATTTCAGAGCTAACACCTCCCTCCAAGAGAGCTAGAGTTTGTGTGAGAGCTAGATGTGATACTCCCACGATGCATGATGGATGCCAGTGGAGGAAATATGGACAAAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACACTTGCTCCAGCATGCCCGGTTAGGAAACAGGTGCAAAGATGTGCTGAGGACATGTCCACTTAA | 762 | 0.4003 | MEAMLKLSSLCGQEIGVKRGASIWSEEDFFIEKGSKEDKLESAKAEMGKVKEENERLKMMLEKVEKDYHSLQLRFFDILHREAFKKGVEDSAASPDEEEEPKLVSLCLGRSPREPKKDGIIGNSSKPKENEDLEASLTLGLDSKSVSSKEQVSAMSPMNTSEELKEKNSTNKSERTKDGGDEISELTPPSKRARVCVRARCDTPTMHDGCQWRKYGQKIAKGNPCPRAYYRCTLAPACPVRKQVQRCAEDMST | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g2331 | 253 | Gene3D | WRKY domain | 193 | 253 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu8g2331 | 253 | SMART | WRKY_cls | 206 | 253 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu8g2331 | 253 | PANTHER | WRKY TRANSCRIPTION FACTOR 72-RELATED | 35 | 252 | - | - | |
Ssu8g2331 | 253 | MobiDBLite | consensus disorder prediction | 89 | 104 | - | - | |
Ssu8g2331 | 253 | MobiDBLite | consensus disorder prediction | 140 | 164 | - | - | |
Ssu8g2331 | 253 | SUPERFAMILY | WRKY DNA-binding domain | 199 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu8g2331 | 253 | Coils | Coil | 33 | 74 | - | - | |
Ssu8g2331 | 253 | Pfam | WRKY DNA -binding domain | 208 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu8g2331 | 253 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 35 | 252 | IPR044810 | GO:0003700 | |
Ssu8g2331 | 253 | ProSiteProfiles | WRKY domain profile. | 201 | 253 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu8g2331 | 253 | MobiDBLite | consensus disorder prediction | 165 | 188 | - | - | |
Ssu8g2331 | 253 | MobiDBLite | consensus disorder prediction | 111 | 135 | - | - | |
Ssu8g2331 | 253 | MobiDBLite | consensus disorder prediction | 89 | 191 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g2331 | Ssu-Chr8 | 60733727 | 60735952 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g2331 | 47 | 252 | WRKY Transcription Factor Family | AT5G15130 | 48.936 | 1.34e-53 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Ssu8g2331 | WRKY | 1.1e-17 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g2331 | - | - | ccaj:109788554 | 409.838 |