Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2330 ATGGCTTCCACCACTTCTGCTGCTGTTTCCATGTTGTTGTCAGGTTCTTCAACATCTCAGCCTACAGATCACGGTTTTGCATCTTTTGCAAATTCTCCTACACTGTTCAGTAGTGTGAATTTCAGTCTTTTAGATCAACCAAGAGCAAATCAAGCCTTGTTACCAACCTGTTCCTCACATTTATTCCCAACAGTCACTCTAGACCTGACTTCTGCTCCATCATCCCAATCAACTCATGTCCATTGTTTACCTTCAAACTTTGCTTCAACCCCAAGATTCCCTCCTTTAAGTTTAAACTTTTGCTCCCCAGAGTCCAACATCACACCATCCTTTTCGGGCAAGGGACTTCCTAACAATGGCACTACTGTGCCTATTGACAAAACTCACATCAAGCCATTCAATATGGGAAACCAATTTCAAGAACATTTCTACCAACAATGCTTCAAGAACCAAACTCCATTCAGGGAAGCTTTGGCAGAAACACTAACCAAAGCAATCAGCACAGACACGAGTCTTCAGTCTGCGATAGCTGCTGCAGTTTCATCTATAAGGGGACAAGGATCAAGCAGTGGGAACAAGGGTGATGAAGAGATTTTAGGTGCAGGCTTGAGCCTGAAACTCGGGGAGCATTCTCAACTTGATTCTTCCAATTCCTTGAACCAGAATGGGAAAGTATGCTTAACAGGTTTCTTCAACAGATCATCATCATCTACAAGTTCTCAGGGTGGAAACTCCATGCTTCTCCAACCTCGATGGCCATTTTCTCTTCCCAAGACTAGCACTCCTCCTTCCAATATTGATTACATCAACCATTGGATTTCAGAAATCAATTCTCATCATTAG 843 0.4282 MASTTSAAVSMLLSGSSTSQPTDHGFASFANSPTLFSSVNFSLLDQPRANQALLPTCSSHLFPTVTLDLTSAPSSQSTHVHCLPSNFASTPRFPPLSLNFCSPESNITPSFSGKGLPNNGTTVPIDKTHIKPFNMGNQFQEHFYQQCFKNQTPFREALAETLTKAISTDTSLQSAIAAAVSSIRGQGSSSGNKGDEEILGAGLSLKLGEHSQLDSSNSLNQNGKVCLTGFFNRSSSSTSSQGGNSMLLQPRWPFSLPKTSTPPSNIDYINHWISEINSHH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2330 280 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 1 260 - -
Ssu8g2330 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 260 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2330 Ssu-Chr8 60732831 60733673 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2330 - - gmx:100819296 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2330 8 60732831 60733673 Ssu1g2144 1 61101181 61106086 ECH
Ssu8g2330 8 60732831 60733673 Ssu6g1285 6 20863593 20868078 ECH
Ssu8g2330 8 60732831 60733673 Ssu8g2330 8 60732831 60733673 ECH
Ssu3g0486 3 11597723 11600363 Ssu8g2330 8 60732831 60733673 ECH
Ssu2g1633 2 64931430 64933682 Ssu8g2330 8 60732831 60733673 ECH