Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g2324 | ATGGGGTGCGTTGTTGGTGTTGATGTTGGTACCAAGAGTGCGGGAAAATCCAAGGGAGGGAGAAACAACAAAGATGTTGTTCAAGGTACTACTGAAGAAGGCTCAGGATTTTGGAGGAAAGTCGGGATTTTTCTAGGTTGCATACCTCTGAATTCCAAAGGGGAAGGTTCCCCCAATGACAAAAGCAAACAAGGAAGAGAAGTTAGAAATGATAATGCTAGACACCAACCGGTTACTCCAACATCCTCATCCAACAGAAGGTCAAGAAGCTATGCAAGATCATGCACTCCCAACCTAAGCCAGGAATTACAAGTAGCTTCTTCCCTTCTTCGAAGGTTCACCTTTAATGATCTTAAGTTGGCAACAAGGAATTTCAAGGCCGAGAATTTTCTTGGTGAGGGGGGGTTTGGAACAGTGTTGAAAGGTTGGGTCAGTCCGCATGGGAACTATGCAGCCAGGCCTGGAATGGGGATTCCTGTTGCAGTGAAGAGTCTCAACCTAAATGGATTTCAGGGTCATAGGGAATGgcttGCTGAAATTAGTTATCTTAGTGAACTCCATCATCCGAATCTGGTTAGACTGGTTGGCTTTTGCATTGAGGATGACAAAAGGCTACTGGTATATGAGTATATGTGTCGAGGAAGCTTAGAGAAACATCTGTTCAAGACGGGTAGTATGCGCCTTACGTGGCCTATCAGAATGAAAATTGCGATTGGTGCTGCAAAGGGCCTTGCATTTTTGCATGAGGAAGCTTCAAGGCCAGTGATATTTCGAGACTTCAAAACATCAAATATCCTATTGGATGTGAACTACAATCCAAAACTTTCCGATTTTGGGCTTGCCAAAGATGCTCCAGTGGGAGATGCAAGTCATGTATCAACTCGAGTAATGGGAACACACGGCTATGCAGCTCCTGAGTATATGATGACAGGACACCTTACTGCCAAGAGTGATGTCTACAGCTTTGGGGTGGTTCTACTTGAAATACTGACAGGAAGAATGGCCTCGGACAAAAAAATGTCTGAGGGGGAGCAAAACTTGGTGGAATGGTTGCGCCCTCTTCTTAAGAGCAAAGGAAATTTCAGCTATCTGATGGACCCTAGACTTGAAGGTCAATACTCAATGAAAGGTGCTCATAGAGCAATGAGGTTGGCTACTCACTGTACTCGCTTTGACCCTAAAAGAAGACCCCTTATGAGTGAAGTGGTCCGTGTGTTGAAGTCTTTGTCTCttcatgatgatgatgacatgGCTGCTCAGCCTGGTCCCTCAACCTCACTTCCCTCACATCCAACCACAATTCCATCAACCTCACTTCAGAGAATGCATGTAGGCCCCTCCAATTACCATGGTGCTACTAACAAGTACGGCCTCAGAACTGGTCCAACACCAAACGTTCCAAGGCGCTTTCAAGCCTCGCCACTGAGCCAAGACTATCCTCTACCTCCACCAAATCCTGGTGCTGGACCTTCAAGCAACCCTAGTGTTGCATCTTCATCCAACCCTAGTGTTGGACAACCATGA | 1524 | 0.4534 | MGCVVGVDVGTKSAGKSKGGRNNKDVVQGTTEEGSGFWRKVGIFLGCIPLNSKGEGSPNDKSKQGREVRNDNARHQPVTPTSSSNRRSRSYARSCTPNLSQELQVASSLLRRFTFNDLKLATRNFKAENFLGEGGFGTVLKGWVSPHGNYAARPGMGIPVAVKSLNLNGFQGHREWLAEISYLSELHHPNLVRLVGFCIEDDKRLLVYEYMCRGSLEKHLFKTGSMRLTWPIRMKIAIGAAKGLAFLHEEASRPVIFRDFKTSNILLDVNYNPKLSDFGLAKDAPVGDASHVSTRVMGTHGYAAPEYMMTGHLTAKSDVYSFGVVLLEILTGRMASDKKMSEGEQNLVEWLRPLLKSKGNFSYLMDPRLEGQYSMKGAHRAMRLATHCTRFDPKRRPLMSEVVRVLKSLSLHDDDDMAAQPGPSTSLPSHPTTIPSTSLQRMHVGPSNYHGATNKYGLRTGPTPNVPRRFQASPLSQDYPLPPPNPGAGPSSNPSVASSSNPSVGQP | 507 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g2324 | 507 | ProSitePatterns | Protein kinases ATP-binding region signature. | 131 | 163 | IPR017441 | GO:0005524 | |
Ssu8g2324 | 507 | Pfam | Protein tyrosine and serine/threonine kinase | 127 | 405 | IPR001245 | GO:0004672|GO:0006468 | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 422 | 444 | - | - | |
Ssu8g2324 | 507 | Gene3D | Transferase(Phosphotransferase) domain 1 | 211 | 421 | - | - | |
Ssu8g2324 | 507 | PANTHER | OS01G0588500 PROTEIN-RELATED | 68 | 439 | - | - | |
Ssu8g2324 | 507 | ProSiteProfiles | Protein kinase domain profile. | 125 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 59 | 73 | - | - | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 491 | 507 | - | - | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Ssu8g2324 | 507 | Gene3D | Phosphorylase Kinase; domain 1 | 85 | 210 | - | - | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 54 | 95 | - | - | |
Ssu8g2324 | 507 | PANTHER | TYROSINE KINASE FAMILY PROTEIN | 68 | 439 | - | - | |
Ssu8g2324 | 507 | SUPERFAMILY | Protein kinase-like (PK-like) | 106 | 406 | IPR011009 | - | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 413 | 507 | - | - | |
Ssu8g2324 | 507 | MobiDBLite | consensus disorder prediction | 74 | 95 | - | - | |
Ssu8g2324 | 507 | CDD | STKc_IRAK | 131 | 409 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g2324 | Ssu-Chr8 | 60671767 | 60676853 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g2324 | 57 | 437 | Glycoside Hydrolase | AT3G07070 | 44.271 | 1.50e-103 | 315 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Ssu8g2324 | PK_Tyr_Ser-Thr | 1.3e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g2324 | - | - | ccaj:109817012 | 712.605 |