Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2283 ATGACCTTCTCGGGGCGTGTGTCAGACAATATGGGGAAGGAAAATGGCTTGAACAGGTGCCGCAAAAGCTGGAGACTGCGGTGGTTGAATTATCTAAAATCAAATATCCAGCGAGGAACGTTCACTGAGGATGAAGTTCATATGATGCGAAGATTGCATAAACTTTTGGGAAACAgGAAGGTATCATCTCATAAGGTGTTCATCAATGAAAAGGAGGAGGAAACAGTGAAACCCCACGTGGTGATAAAGCCCCCGGGCTCGAACTATCTCAAGAGGGAGTGTCCTTAG 288 0.4583 MTFSGRVSDNMGKENGLNRCRKSWRLRWLNYLKSNIQRGTFTEDEVHMMRRLHKLLGNRKVSSHKVFINEKEEETVKPHVVIKPPGSNYLKRECP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2283 95 SUPERFAMILY Homeodomain-like 18 59 IPR009057 -
Ssu8g2283 95 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 12 59 - -
Ssu8g2283 95 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 12 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2283 Ssu-Chr8 59625254 59626778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2283 16 59 MYB Transcription Factor Family AT1G66370 72.727 6.33e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2283 - K09422 gmx:100306270 98.2117