Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu8g2265 | ATGTTTGCTTTGAAGAAGGTGCGCTTTGACAATTTCCAACCCGAGAGCATTAGGTTCATGGCAAGAGAAATAACTATCCTCCGTAGGCTTGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCCCGCCTTTCAAATAGCATATACCTTGTGTTTGAATACATGGAGCATGATCTTGCTGGCCTAGTATCACGCGCTGACATTGTGTTCACTGAATCACAGATAAAATGTTACATGAGGCAGCTATTAAGTGGACTTGAGCATTGTCATATGCGTGGTATCATGCATCGAGACATCAAAGTATCAAATATCTTATTGAACAATGAAGGTGTTCTCAAGATAGGGGATTTTGGATTGGCAAATACAATTAGCACAAATAACAAGCACCATTTGACAAGTCGCGTTGTGACTCTGTGGTATCGCCCTCCTGAGCTCTTGATGGGATCAACCAACTATGGAGTGTCAGTGGATCTGTGGAGTGTTGGCTGTGTGTTTGCAGAACTTTTTCTTGGGAAGCCTATCCTTAAGGGGAGAACTGAGGTTGAACAAttacacaaaatttttaagctGTGTGGTTCTCCACCTGAGGAGTTCTGGAAAAAGAGCAAGCTTCCTCATTCAACAATGTTTAAACCTCAGACTAATTATGAAAGCTCTCTTCGGGAGAGGTGTGCAGATTTTCCTGTTACTGCTGTAAACCTACTTGAGACTTTACTGTCCATTGACTCAAGCAACCGGGGGACTGCCTCATCTGCCCTCATGTCTGAGTGGGAAGGTTGCTACCTTCTGACATGA | 801 | 0.427 | MFALKKVRFDNFQPESIRFMAREITILRRLDHPNIMKLEGIITSRLSNSIYLVFEYMEHDLAGLVSRADIVFTESQIKCYMRQLLSGLEHCHMRGIMHRDIKVSNILLNNEGVLKIGDFGLANTISTNNKHHLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKSKLPHSTMFKPQTNYESSLRERCADFPVTAVNLLETLLSIDSSNRGTASSALMSEWEGCYLLT | 266 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu8g2265 | 266 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 96 | 108 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu8g2265 | 266 | Gene3D | Transferase(Phosphotransferase) domain 1 | 59 | 262 | - | - | |
Ssu8g2265 | 266 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 58 | - | - | |
Ssu8g2265 | 266 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 259 | - | - | |
Ssu8g2265 | 266 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 259 | IPR011009 | - | |
Ssu8g2265 | 266 | Pfam | Protein kinase domain | 2 | 259 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g2265 | 266 | ProSiteProfiles | Protein kinase domain profile. | 1 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu8g2265 | 266 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 259 | - | - | |
Ssu8g2265 | 266 | SMART | serkin_6 | 1 | 260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu8g2265 | Ssu-Chr8 | 59176675 | 59178584 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu8g2265 | 1 | 259 | Core Cell Cycle Gene Families | AT5G10270 | 49.091 | 3.70e-87 | 266 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Ssu8g2265 | Pkinase | 5.3e-61 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu8g2265 | - | - | gmx:100787268 | 505.368 |