Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2258 ATGGAGAGGGTGAAAAGGGTGTTATCACCACCCATGGTGCTTCTGTTTCTAGCCTTCACAGTGCTTGTGATGTTGCCAGAAGCTTCTGCTACAAAGTGGACTGTTGGAAACAACCAGTTTTGGAACCCCAATATTAACTACACTGAGTGGGCTAAAGGCAAACATTTCTACATTGATGACTGGCTCTATTTTGTGTATGATAGGAACCAGATGAGCGTGCTGGAAGTGAACAAGACAGATTATGAAAGTTGCAACTCTGATCATCCAATCACCAATTGGACTAGGGGAGCTGGAAGAGATGTGGTTCCACTGAATGTAACCCGCACTTACTATATCATCAGTGGCAAAGGGTTCTGCTTTAGTGGCATGAAGGTGGCTGTTCATGTTGAAAAGCTACCACCTCCTCCAAAAGCCTCCCCTATAAAGGCTGGGGCACCAACCCTTTCCTTTAGTGGCCACATTCTTCTCATGCCTCTTGTTTTTGCCATTGGAGCAGCATGGGATGCATTCATTCATTTCTGGTAG 525 0.4552 MERVKRVLSPPMVLLFLAFTVLVMLPEASATKWTVGNNQFWNPNINYTEWAKGKHFYIDDWLYFVYDRNQMSVLEVNKTDYESCNSDHPITNWTRGAGRDVVPLNVTRTYYIISGKGFCFSGMKVAVHVEKLPPPPKASPIKAGAPTLSFSGHILLMPLVFAIGAAWDAFIHFW 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2258 174 Gene3D - 29 132 IPR008972 -
Ssu8g2258 174 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
Ssu8g2258 174 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Ssu8g2258 174 PANTHER LAMIN-LIKE PROTEIN 9 166 - -
Ssu8g2258 174 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
Ssu8g2258 174 PANTHER BLUE COPPER PROTEIN 9 166 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2258 Ssu-Chr8 59078584 59080133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2258 15 174 Phytocyanin Superfamily AT5G15350 56.790 3.56e-67 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2258 - - gmx:100305564 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2258 8 59078584 59080133 Ssu8g2258 8 59078584 59080133 ECH