Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2208 ATGAGGTTCCTCAGTACCACCTCCTTAAcgctcttcctcctcctccacctcTCCATACACCTCCAAGCGTACACCCCAGAGGAAGTTTTCACCATCAGTTGCGGCACCACCGGGAAATCCTTCGACGGCGAAAGGACATGGACGGGGGACGCAGACTCCAAGTACTTATTATCTGGTCAAGACGGCGCCGTTCCAGCTAAAGCAACAACACAATCTCCTTCAACCAATCGAGTCCCATACACCACAGCACGCTTGTCCCGTTCCCAATTCAATTACTCCTTCCCCGTTTCTGCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCTGCTTCTTACCCTTCCTTTCCCCGCACTGACGCATCCTTCACCGTTCAGTCCAACCAATTCACACTCCTCAACGGTTTCAACGCCTCTCTAAACGCCGATGCGGAAAACACAGAAACCGTCTTCAGAGAATACGTGGTCAACGTGGGCAACGGCGAGAGGCTGGACCTCAGCTTCACTCCATCGCAACCAAACTCCTACGCCTTCATCAACGGAATCGAGGTACTTTCCATGCCGAGCGACCTGTATTACACGTCAGCAACTGACGTGGGATTCAAGTTCCTGGGAAGTGACACCCTGTACAGCGTCGGAACCAGCTTGGCGCTGGAGACAGAGTATAGAATCAAAGTGGGAGGGCAAGAAATCTCGCCACGGAACGACACCGGTTTGTTCAGGAACTGGGCTGGTCACGATGAAGATTATTTAACGACACCAATTCTAAAGGATAATCTACCACTTGACGATGGTGGTAGGAACATAACCGTGAATCCTGATTACGTGGCACCCAAGGAACTTTACAGAACAGCGCGTGACATGGGCAAAAACGCCACTCTGAACCAAGGCCTCAACTTGACTTGGGAGTTCCCCGTTGATACTGGCTTCACTTACATGGTCAGGCTCCACTTTTGTGAACTTGACCCCAATATTACTGACCTCGGTTACAGGGTGTTCTTCATTTACATAGCGAGCCAGGTGGCTGAGGACCACGCTGATGTTATGAAATGGAGCCAGAGACAGAGAGGTCTCGCTGTGTACAGAAACTACGCCGTTTTGATTCCCAAGAATAATGCTCAAAAAAAGGTTAATCTCTCGCTTCAAATGCATCCTTATGGAAATAGCAGGGATACGAAATACAGCGACCCGTTCTTGAACGGTCTCGAGATATTCAAAATCAGTGACCCCGGGACTAACAACCTCGCCGGACCAAACCCGGACCCGGTTCAGACTCCACAGAGCAACATCCCCGTCCAAAAGGGAAAGAGCAGCAGCGGAAGCGGAACGACGATAATTGGCATCGTCACGGGGGTGGTATCCGGCGTCGTTTTGATCTCGCTTGTCGTTTTCTTCGTGGTGTTCATCCGACGCAAGAGAACCACTACAACGAAACCCAAGGATTACAAGTCCAAGTCGTCCGCGACTTCCAAGTGGGGTCCACTCTCGTTCTCAACGACCAAGTCAAGCAACACGCAGAACTCCTCCCTGCCGTCCGATCTCTGCCGCCACTTCTCCCTCGCGGAGATCAAAGCCGCCACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGGGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCACCCCGGTCGCCATCAAGCGTCTCAAACCTGGTTCACAGCAAGGGGCACACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCACCTCCACCTCGTGTCCCTCATCGGGTACTGCAACGAGAACAACGAGATGATCCTCGTCTACGACTTCATGGCGCGTGGCACGCTACGCGACCATCTCTACAACACCGAAAACCCCCCTCTCACGTGGAAGCGGCGCTTGCAGATCTGCATCGGCGCCGCGCGTGGGCTGCATTATCTCCACACGGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACCACCAACATCTTGTTGGATGACAAATGGGTGGCCAAGGTTTCGGACTTCGGGCTCTCCAGAATTGGGCCCACGGGCATGGACAAGGCCCATGTTAGCACTGTCGTGAAGGGCAGCATTGGGTATTTAGACCCGGAGTATTACAAACGGCAGCGTCTGACAGAAAAGTCTGACGTGTACTCTTTTGGAGTGGTGTTGTTTGAGCTACTCTGCGCTCGTCCGCCTCTGATCCGCACCGCGGAGAAGAAACAGGTGTCGCTCGCTGATTGGGCCAGGCACTGTTACCAGAATGGGACCCTGGGCCAGATTGTGGACCCCACGCTGAAGGGGAGGATTGCGCCCGAGTGCTTGAGGAAGTTTTGCGAAATTGGGGTGAGTTGTTTGTTGGACGATGGGACCCAGAGGCCGTCGATGAACGATGTCGTTTGGATGCTGGAGTTTGCGTTGCAGCTGCAAGAGAGTGCGGAGCAGCGCGAAAATGCGAATATCATTCCCGGAGTTAATGAAAGAAGAGAGGAAATTAATGACGACTTGTTTAGTAGTGGGACCAGTGTGGGGCAGGTTTCGGATTTTAACAAGAGTAGTAGTGCGTTGCAACTGAACTGCATAACAGAAGAGGAACTAACAATGACAGAAACTGAACTGCATAACAGAAAAACAGAAAAGGAGCTCACTATGACAGGAAGATTCAAACTAATCATCTAA 2673 0.5204 MRFLSTTSLTLFLLLHLSIHLQAYTPEEVFTISCGTTGKSFDGERTWTGDADSKYLLSGQDGAVPAKATTQSPSTNRVPYTTARLSRSQFNYSFPVSAGPKFLRLFFYPASYPSFPRTDASFTVQSNQFTLLNGFNASLNADAENTETVFREYVVNVGNGERLDLSFTPSQPNSYAFINGIEVLSMPSDLYYTSATDVGFKFLGSDTLYSVGTSLALETEYRIKVGGQEISPRNDTGLFRNWAGHDEDYLTTPILKDNLPLDDGGRNITVNPDYVAPKELYRTARDMGKNATLNQGLNLTWEFPVDTGFTYMVRLHFCELDPNITDLGYRVFFIYIASQVAEDHADVMKWSQRQRGLAVYRNYAVLIPKNNAQKKVNLSLQMHPYGNSRDTKYSDPFLNGLEIFKISDPGTNNLAGPNPDPVQTPQSNIPVQKGKSSSGSGTTIIGIVTGVVSGVVLISLVVFFVVFIRRKRTTTTKPKDYKSKSSATSKWGPLSFSTTKSSNTQNSSLPSDLCRHFSLAEIKAATNNFDDVFIVGVGGFGHVYKGYIDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNENNEMILVYDFMARGTLRDHLYNTENPPLTWKRRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGMDKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVSLADWARHCYQNGTLGQIVDPTLKGRIAPECLRKFCEIGVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQRENANIIPGVNERREEINDDLFSSGTSVGQVSDFNKSSSALQLNCITEEELTMTETELHNRKTEKELTMTGRFKLII 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2208 890 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Ssu8g2208 890 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 15 813 - -
Ssu8g2208 890 PANTHER OS07G0166700 PROTEIN 15 813 IPR045272 GO:0004714|GO:0006468
Ssu8g2208 890 MobiDBLite consensus disorder prediction 480 509 - -
Ssu8g2208 890 ProSiteProfiles Protein kinase domain profile. 529 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g2208 890 MobiDBLite consensus disorder prediction 476 509 - -
Ssu8g2208 890 Gene3D Transferase(Phosphotransferase) domain 1 606 828 - -
Ssu8g2208 890 Gene3D - 25 187 - -
Ssu8g2208 890 Gene3D - 215 407 - -
Ssu8g2208 890 SUPERFAMILY Protein kinase-like (PK-like) 501 804 IPR011009 -
Ssu8g2208 890 Pfam Malectin-like domain 32 406 IPR024788 -
Ssu8g2208 890 Gene3D Phosphorylase Kinase; domain 1 492 605 - -
Ssu8g2208 890 MobiDBLite consensus disorder prediction 412 439 - -
Ssu8g2208 890 SMART serkin_6 529 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g2208 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Ssu8g2208 890 CDD STKc_IRAK 535 802 - -
Ssu8g2208 890 Pfam Protein tyrosine and serine/threonine kinase 535 799 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2208 Ssu-Chr8 58125457 58129644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2208 19 833 Receptor kinase-like Gene Family AT3G51550 52.569 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu8g2208 Malectin_like 2.1e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2208 - - gsj:114381619 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2208 8 58125457 58129644 Ssu8g2208 8 58125457 58129644 ECH