Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2206 ATGACGCAAACATCAGCTACAGGCTTCAAAGTTATCCAAGTTTGTTCAGTGCCACCGCTTCAGGAACCAACCCCCTCCACCGTTCCAACATCTCTTCCACTAACCTTTTTTGACCTTTTCTGGCTACGCTTTCCACCCGTTGAGCGTCTCTTCTTCTATCCCTTCCCACACCCAACCTCTTCATTCCTTCACTCCCTTCTTCCCACTCTCAGACACTCTCTTTCCCTCACTCTCCAACACTTCCTCCCTTTCGCTGGCACCCTCACATGGCCCTCTCACTCTTCCAAACCCATCATCAGCTACGTCCCTGGCGATGCTGTCTCCTTCACCGTTGCGGAGTCCAACGAAAACTTCAACCATCTTTGCTCTCATCTCTGTGAAGCAGCGCAACGACACCGTTTGATACCCCACTTGACCATTTCCCATGATCAAGCATCCGTGTTGGCACTTCAAGTCACTGTGTTCCCAAACGCTGGATTTTGCATTGGAATAACCACACACCATGCCGCCTTTGACGGAAAGTCTTCAACCATGTTCATCAAATCATGGGCCTATATATGCTCTAACCTTGTGGGCCCTACACCTACAGCATCCTTGTCGTTACCTCAGCATCTCGCACCTTTCTTTGACAGATCAGTGATAAGAGACCCTTCAGGAATCGGTGAAGCGTACGTGGACACGTGGATGAAGAACGGAGGACCAAATAATCGAAGTCTCAAGGTGCGGGAATCCCTTATGGAAAACCCGAGCGATGCAGTTAAAGGTTTGTTTGAATTAACCCCTTCACAGATTCTAAAGCTCAAGCAACATGCAAAGTCTAAGCTGAAAATGAAGGTTCAGTTGTCAACGTTTTCTGTGACGTGTGCTTATGTGTTGACGTGTTTGGTCAAAGCGGAACAACCAAAGGAAGATAACAATGTGTTTTTCGTGTTTAGTGTGGACTGTAGATCCCGCTTGGACCCTCCCATTCCTGCCACGTATTTTGGAAATTGCGTTGCGGGACAAAGGGTTATGGCTGTGACAAAGAAGTTAGTTGAAAATGGTGGGTTCATTAGTGCTTTGGAGGGGATAAGTGAGGCTTTGAATAGAGTGAAGGATGGAGTACTGCTAAATGGAGCAAAAACTAGGGTTTCGGACATGCATAAAATAGTGGAGGGAAGAATATTCTCTACTGCTGGATCGCCGTGGTTTGAGGTTTATAGTACTGATTTTGGATGGGGAAGGCCAATGAAGGTGGATATGACATCCACAGACAAAACAGGAGCATTTTCTCTCTCTGAAAGTAGGGATAACAGTAGAGGAATTGAGATTGGATTAGCGTTACGTAAACATGATATGGAAGCTTTTACTGCCCTTTTTGTTCAAGAACTTGAATccttttaa 1383 0.4599 MTQTSATGFKVIQVCSVPPLQEPTPSTVPTSLPLTFFDLFWLRFPPVERLFFYPFPHPTSSFLHSLLPTLRHSLSLTLQHFLPFAGTLTWPSHSSKPIISYVPGDAVSFTVAESNENFNHLCSHLCEAAQRHRLIPHLTISHDQASVLALQVTVFPNAGFCIGITTHHAAFDGKSSTMFIKSWAYICSNLVGPTPTASLSLPQHLAPFFDRSVIRDPSGIGEAYVDTWMKNGGPNNRSLKVRESLMENPSDAVKGLFELTPSQILKLKQHAKSKLKMKVQLSTFSVTCAYVLTCLVKAEQPKEDNNVFFVFSVDCRSRLDPPIPATYFGNCVAGQRVMAVTKKLVENGGFISALEGISEALNRVKDGVLLNGAKTRVSDMHKIVEGRIFSTAGSPWFEVYSTDFGWGRPMKVDMTSTDKTGAFSLSESRDNSRGIEIGLALRKHDMEAFTALFVQELESF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2206 460 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 6 459 - -
Ssu8g2206 460 SUPERFAMILY CoA-dependent acyltransferases 279 368 - -
Ssu8g2206 460 Gene3D - 9 238 IPR023213 -
Ssu8g2206 460 Gene3D - 248 460 IPR023213 -
Ssu8g2206 460 PANTHER - 6 459 - -
Ssu8g2206 460 Pfam Transferase family 27 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2206 Ssu-Chr8 58109014 58110396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2206 69 455 Monolignol Biosynthesis Gene Families AT5G48930 25.500 1.00e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2206 - - gmx:100800849 682.559