Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2205 ATGGACAAGGCCCATGTCAGCACCGCTGTAAAGGGCAGCTTTGGATATTTAGATCCGAAGTACTATAAACGGTACCGTTTGACGGAGAAGTCTGACGTGTACTCTTTTAGAGTAGTGCTGTTTGAGATACTGTGCGCTCGGCCGCCTCTGCTCCGCACGGCGGGAATGGAACAGGTGTCACTTTCTAATTGGGCCAGGAACTGTTACAAAAATGGAACCGTGGCGCAGATTGTAGACCCTACGTTGAAGGGGAGGATTGCGCCCGAGTGCTTCAAGAAGTTTTGCGAGATTGGAGTGAATTGTTTGTTGGAGGATGGGACGCATAGGCCGTCCATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGCTACAAGAGAGTGCGGACCagagcaaaaatgaaaaaggaaaagaaattagtTACAATACATTTAGTAAAAACAGAACTTGTATCATTGTAGGTGGAGGCTGA 474 0.4599 MDKAHVSTAVKGSFGYLDPKYYKRYRLTEKSDVYSFRVVLFEILCARPPLLRTAGMEQVSLSNWARNCYKNGTVAQIVDPTLKGRIAPECFKKFCEIGVNCLLEDGTHRPSMNDVVWMLEFALQLQESADQSKNEKGKEISYNTFSKNRTCIIVGGG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2205 157 Pfam Protein tyrosine and serine/threonine kinase 6 117 IPR001245 GO:0004672|GO:0006468
Ssu8g2205 157 Gene3D Transferase(Phosphotransferase) domain 1 1 149 - -
Ssu8g2205 157 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 4 147 - -
Ssu8g2205 157 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g2205 157 PANTHER OS07G0166700 PROTEIN 4 147 IPR045272 GO:0004714|GO:0006468
Ssu8g2205 157 SUPERFAMILY Protein kinase-like (PK-like) 5 119 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2205 Ssu-Chr8 58039355 58040616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2205 1 137 Receptor kinase-like Gene Family AT3G51550 66.423 1.14e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu8g2205 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2205 - - gmx:100799780 237.654