Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2202 ATGAGGGTGAGGCAGCACAACAAAGGGAATTTGGGAGCCAGTGGGGCTCGAATCGTCAAGGATTCCTGTTACGTGTGGACGTGTTTGGTCAAAGCAAAACAACCAAAGAAAGATAATGTACTTTTCGTATTCAATGTGGACTGTAAATCCCGCTTGGACCCTCCAATTCCAGCCGCGTATTGTGGAAATTGCGTTGCAGACCAAAAGGTTATGGCTGTGACAAAGGACTTAGCAGGAAATGATGTATTCATTAGTGCTTTGGAGGGAATAGATGAAGCTGTGAATAGAGTGAGGGATGGAGTGCTAAGTGGAGCAGAAACTTGGGTTTCAGATACGCATGGAACAGTGGAGGCTGGAATGCTCGCTGTTGGTGGATCGCCACGGTTTGAAGTTTATAGTACTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGACTTCCATAGACAGAATAGGAGCATTTTCTTTAAGTGAAAGTAGGGATAATAGTGGAGGAATTGAGATTGGATTGATGTTAGGTAAACGTGTGATGGAAGCTTTTACTACCCTTTTTGTGTGA 561 0.4439 MRVRQHNKGNLGASGARIVKDSCYVWTCLVKAKQPKKDNVLFVFNVDCKSRLDPPIPAAYCGNCVADQKVMAVTKDLAGNDVFISALEGIDEAVNRVRDGVLSGAETWVSDTHGTVEAGMLAVGGSPRFEVYSTDFGWGRPKKVDMTSIDRIGAFSLSESRDNSGGIEIGLMLGKRVMEAFTTLFV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2202 186 Pfam Transferase family 23 182 - -
Ssu8g2202 186 PANTHER - 23 186 - -
Ssu8g2202 186 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 23 186 - -
Ssu8g2202 186 Gene3D - 22 186 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2202 Ssu-Chr8 57974588 57976600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2202 24 181 Monolignol Biosynthesis Gene Families AT5G48930 26.627 3.80e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2202 - - gmx:100800849 228.794