Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2187 ATGGCTGTGTTGATGGCAATTGTTGGTGTAGTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTGCCTCATGGCACAATGGGTTGGCCAGTTTTTGGGGAGACAACTGAGTTTCTTAAGCAGGGTCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGTTGTCCTACCATTGTGTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAGGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGTAACATTGCAGCTGTTCATGGCTCCACCCACAAGTACATGAGAGGAGCACTGCTTTCCGTCATTAGCCCCACCTTGATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAGCCCACCTAAGCAACTGGGATAACAAAGTCATCAACATTCAAGAGAAAACTAAAGAGATGGCCTTTCTCTCATCTCTGAAGCAGATTGCTGGCATAGAATCTAGCTCATTATCTGACCCATTCATGACAGAGTTCTTTAAGCTAGTTCTAGGAACCCTTTCTCTCCCTATTGACCTTCCTGGGACAAATTACCGCCGTGGATTCCAGGCAAGGAAGACTATAGTCAACATTCTGAGTAAGCTACTAGAGGAAAGGAGAGCATCCCATGAAACCTACCATGACATGCTTGGTTGCTTGATGAGAAGAGATGAAAGTAGATACAAGCTAAGTGATGAAGAAATCATTGATCTAGTGATTACAGTTATGTATTCTGGTTATGAAACTGTTTCAACTACATCCATGATGGCTGTGAAGTACCTCCATGACCATCCCAAAGCACTTGAAGAACTTAGAAATGAGCATTTGACCATAAGAGAGAGGAAAAAGACAGATCATCCACTTGACTGCAACGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCTAGGTTGGCCACAATAGTTAATGGGGTCCTAAGGAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATTCCCAAAGGATGGAGAATATATGTGTATACAAGAGAGATAAATTATGACCCTTTTCTATATCCTGATCCACTAACATTCAATCCATGGAGATGGCTGGATAAGAGTCTAGAGTCAAAAAACTACTTCTTGATATTTGGAGGAGGCACCAGACAGTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGagataaactaatgaaatttcCTAGAGTTCAGGCACCTAATGGACTGCACATAAGGGTGACATCTTACTAA 1392 0.4145 MAVLMAIVGVVLVLCFCSALLRWNEVRYRKKGLPHGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSVISPTLIRDQLLPKIDEFMRAHLSNWDNKVINIQEKTKEMAFLSSLKQIAGIESSSLSDPFMTEFFKLVLGTLSLPIDLPGTNYRRGFQARKTIVNILSKLLEERRASHETYHDMLGCLMRRDESRYKLSDEEIIDLVITVMYSGYETVSTTSMMAVKYLHDHPKALEELRNEHLTIRERKKTDHPLDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWLDKSLESKNYFLIFGGGTRQCPGKELGITEISTFLHYFVTRYRWEEVGGDKLMKFPRVQAPNGLHIRVTSY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2187 463 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 SUPERFAMILY Cytochrome P450 27 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 Pfam Cytochrome P450 34 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 461 - -
Ssu8g2187 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Ssu8g2187 463 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g2187 463 PANTHER CYTOCHROME P450 26 5 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2187 Ssu-Chr8 57675682 57678846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2187 81 463 Cytochrome P450 AT5G38970 70.833 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2187 K09590 - gmx:100805958 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2187 8 57675682 57678846 Ssu3g0328 3 6249649 6253280 PCT