Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2158 ATGAGGAGTGGAAGTGTTGCACCTAAGGCAGAGGAGCAAAAATCAAGAAGGAACAAGAGGGTTGCTGATGAGAATGCTCCTTTGATACCCAAGGCTCAGGAGCGTGATGCTGCAGGGTTTGATGAGTTTAATGGGGCTTCATTTTCTGGGGCTGTTTTCAACTTGTCAACAACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAAAGGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTAACAGCTTTCTTGACAGAGAAGTCAATTGAGTTCATCATTAGGGTTTCCAGGGCAGGGAATCTTTCTTCTTATGGGAGTCTCATGGGGGATGCTTTTGGGAAATATGGGAAAGCTTTGGTGCAGATATGTGTTATAGTCAATAACATTGGTGTGTTGATTATTTACATGATTATTATTGGTGATGTGATATCTGGAACATCTTCTAGTGGACCTCACCATTCTGGTGTCCTTGAAGGATGGTTTGGAGTCCACTGGTGGACTGGGCGTACGTTTGTTCTTGTGTTTACAACAATTGCTGTGTTTGCACCTTTGGTCAGCTTTAAGCGAATTGATTCATTGAAATTCACATCTGCATTATCAGTTGGACTAGCGGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATCTTCAAGATTATAATAGGAGGCATTGAGATGCCCAGACTCTTCCCAATCATTACAGACGTAGTATCAGTTTTTGAACTGTTCACTGTAGTTCCTGTGCTTGTGACTGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCCTCAAAGATGCATGGCGTTGTACGCGCTTCCCTTGTTCTATGTGCTTCAGTGTACTTATTGACAAGCTTCTTTGGGTTTCTCCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGACACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCACATCTTGTGCTGGTATTTCCAGTTGTCTTCTATGCAGTGCGCATCAACCTAGATGGTCTCATATTTTCATCATCTAGGCCTTTGGGTCAAGATAACTTCAGATTTGCTTCAATTACTTTTTCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTTATACCCAGCATTTGGGATATTTTCCAGTTTACTGGAGCAACAGCTGCTGTTTGTGTAGCATTCATATTTCCAGCCGCCATCACTCTTCGGGATCGACACAACATAGCAACTAAAACCGACAAGGTACTATCTGTCTTTATGATAGTCTTGGCAATCTTGTCGAACGCTGTGGCTATATACAGTGATGCTTATGCCTTGATCAAGAAGAATAAAACTTATACATGA 1392 0.4195 MRSGSVAPKAEEQKSRRNKRVADENAPLIPKAQERDAAGFDEFNGASFSGAVFNLSTTIIGAGIMGLPACVKRLGMVPGLLAIILTAFLTEKSIEFIIRVSRAGNLSSYGSLMGDAFGKYGKALVQICVIVNNIGVLIIYMIIIGDVISGTSSSGPHHSGVLEGWFGVHWWTGRTFVLVFTTIAVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGISIFKIIIGGIEMPRLFPIITDVVSVFELFTVVPVLVTAYICHYNVHSIDNELEDSSKMHGVVRASLVLCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRINLDGLIFSSSRPLGQDNFRFASITFSLIGVIFLGANFIPSIWDIFQFTGATAAVCVAFIFPAAITLRDRHNIATKTDKVLSVFMIVLAILSNAVAIYSDAYALIKKNKTYT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2158 463 MobiDBLite consensus disorder prediction 1 27 - -
Ssu8g2158 463 ProSitePatterns Serine proteases, subtilase family, serine active site. 150 160 IPR023828 -
Ssu8g2158 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 460 - -
Ssu8g2158 463 MobiDBLite consensus disorder prediction 7 24 - -
Ssu8g2158 463 PANTHER AMINO ACID TRANSPORTER 7 460 - -
Ssu8g2158 463 Pfam Transmembrane amino acid transporter protein 46 450 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2158 Ssu-Chr8 56636516 56640175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2158 4 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 66.667 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2158 K14207 - gmx:100791286 808.52