Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2150 ATGACCGGTGCGGCCGGTTTCCTTGACAACATGGCTGCATGCTTAACCCAAGTTGGTATGGTACATGATGGGGTTCATGGTGGTTATGGGACATTGGAGCCTGATAAAACGGGTTTAGAAAGCGACTTTTCCCTTCCTCCACTAGAAAATAGAAGCATTGAGGACAATAGTAGTACCCCAATTGATGTGAAAAGCCATAACAACAACCACTTCAAGAATAGTTGCTTCAATAACACTGATCATCATACTCAAAGCTCCAACAACGTAGTTGTAGAGGATTTGTTTGGGTTTGGCAATCATGGGCAAGGGGAAAACTTTAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATGTCCTATTTTCCTTCCCTTGATTTCCAAGTTTAA 393 0.4275 MTGAAGFLDNMAACLTQVGMVHDGVHGGYGTLEPDKTGLESDFSLPPLENRSIEDNSSTPIDVKSHNNNHFKNSCFNNTDHHTQSSNNVVVEDLFGFGNHGQGENFRMGEWDFEGLMQDMSYFPSLDFQV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2150 130 MobiDBLite consensus disorder prediction 50 66 - -
Ssu8g2150 130 MobiDBLite consensus disorder prediction 37 66 - -
Ssu8g2150 130 PANTHER MYB DOMAIN PROTEIN 55 4 130 - -
Ssu8g2150 130 PANTHER TRANSCRIPTION FACTOR MYB83 4 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2150 Ssu-Chr8 56465236 56465628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2150 42 130 MYB Transcription Factor Family AT3G08500 33.333 9.28e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2150 K09422 - gmx:100813660 216.853