Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2145 ATGAGGCCAATGAGCAGTTCATCATCAGCCAGTGAGATTAGGAATGGGAAGTCTCCAATTCCTTACCTCTTTGGAGGCTTATCTCTATTGCTGATTATGATTTCTGTGGCATTGGTGATCCTTGTTTGCTCCAAAAGAAACCATGTTTCTCAGTCATCAGCTGAACGTCAAGACATGAAACAGGCAATACCCCATAACATAGAGACTGACTCTGAGCCCAAGATACTAGTGATCATGGCAGGGGATGACAAACCCACCTACCTGGGCAAACCAATCACTTCTTCAACTTGCTGCACCTGTGAAGAATCAAACACTTCATCAAGCTCAAGCAGTGAACAAAGTTAA 345 0.4377 MRPMSSSSSASEIRNGKSPIPYLFGGLSLLLIMISVALVILVCSKRNHVSQSSAERQDMKQAIPHNIETDSEPKILVIMAGDDKPTYLGKPITSSTCCTCEESNTSSSSSSEQS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2145 114 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 111 IPR040359 GO:0080143
Ssu8g2145 114 PANTHER PROTEIN, PUTATIVE-RELATED 5 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2145 Ssu-Chr8 56434130 56434474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2145 18 104 Glutamine Dumper (GDU) Family AT4G25760 44.086 2.35e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2145 - - aprc:113867685 126.716