Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2140 ATGGGGCATGCAAGagcaagcaactccaccatggCTGTGGCACCAAGTGCTGGTATCAAAAACGTTGCCTCTCCCATTCCCTACCTCTTTGGTGGCCTAGCCCTCATGCTTGCACTCGTAGGAGTGGCATTACTTATCCTAGCTTGCTCTTATAGTAAAAATTCTTCATCTACTTCAGATGGTAATGAAGAGAAACAAACCAAGACAATGGGAATAGAGGTAGATTCGGAGCCCAAGATCGTTGTTATAATGGCTGGAGATAGCAACCCCACATACTTGGCAAAGCCAGTGCCATCCACATACCATACTGAAGAAGCAGATTAG 324 0.429 MGHARASNSTMAVAPSAGIKNVASPIPYLFGGLALMLALVGVALLILACSYSKNSSSTSDGNEEKQTKTMGIEVDSEPKIVVIMAGDSNPTYLAKPVPSTYHTEEAD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2140 107 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 104 IPR040359 GO:0080143
Ssu8g2140 107 PANTHER PROTEIN, PUTATIVE-RELATED 5 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2140 Ssu-Chr8 56299098 56299421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2140 24 96 Glutamine Dumper (GDU) Family AT2G24762 52.500 2.51e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2140 - - gmx:102659552 144.05