Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2135 ATGGCTCACCCCATTGATCATGGTCACAACGTAAAAATCATAGAGCAATGTAAAGTTTCTCCCCCACCAAGCTCCGTTCCCTCAACTTCTCTTCCTCTAACCTTCTTTGACATTCCTTGGGTTAACTGTGGCCCAGTGCAAAGCATTTTCTTCTATGAGTTTCCTTACTCTAGTAACCACTTCTTGCAAACAGTGCTTCCCActctcaaacactctctttcCCTAACCCTACAACACTTTTTCCCTTTTGCTGGCAATCTTGTGTTTCCTTTTCAGCCCCACTTCCCTTACATCCTCTACTCAGAGGGTGACTCCCTCTTCTTCACTGTTGCAGAATCCACTATAGAGTTCCCTTGCCTCATAGGTGACACTGCAAGAGATGTTAGAGATTTGCACCCATCTGTTCCCGTGTTGCCTACCCCAGGTACCAAAGAAGATGGCACATGTTCATCCCCTCTTATGGCTATTCAAGTCACCATTTTCCCCAACTATGGGTTCAGCATTTGCATGACTTTTAGACATGTTATTGCAGATGGAAGAGCATTCCTTCATTTCATGAAGTATTGGTCCTATGTTTGTAGGACAAGAAGTGACTTGGCATCCCTTGAAGGCTCTCAAGCTTCGCCATTGCACAATAGGGACATCATTGAAGACCACAAAGGgcttaaactcatttttttggaGGAATTATGGAATTTGCCTACAGAAGGCATAAAAAAACTCGCAGATCCCATCCCTAATGTTATCAACAACAATGAAAAAGTCCGTGTTGTGTTTATGTTGAACAGTGACCATGTtgaaaaactaaagaaattggTGTCTAGTGAGTGCAAGAGTTATGGGTTTGAGTCATTGCACATATCAACCTTTGTGGTGACATGTTCTTTGATGTGGGTTTGTAAGGTCCAGTCAGAAGAGGCCAGTGCTAGAACTATTccaaaaaatgatgaaatctaCAAATTGGCCTTTCTAGCAGATTGTCGTAACCGTCTTCAATTTTCAATTCCTTCAACATACTTTGGAAATTGCATTGTTGGTCACATGGTATCACATAAGAGGAGCAAGCTAGTGGGAGGAAATGGGATTGTTGAGGCAGCGATTGCTATTGGAAGGAAAGTTAGAGATTTTCAGTTTGATGCTTTGAGAGGGGTTGAAGGTTTTATGGCAGACGGTAAAGAAATAGAACAATCAGGAGAACATGTAATAACAATTGCAGGGTCACCAAAGATGGGTGCATATGAGATTGATTTTGGATGGGGAAAGCCCAAGAAGTGTGAAATACTTCATATAGAATATTCAGGAACTATCTCGCTTTCTGATTGTAGGGATGATGAAGGTGGAGTGGAAGTTGAGCTAGTACTTGGAAGGGTTCAAATGAGTAATTTTTCTACTATCTTGGAAGATTATCTTAGAAATTTGCTGGTCGTGACTTGA 1434 0.3982 MAHPIDHGHNVKIIEQCKVSPPPSSVPSTSLPLTFFDIPWVNCGPVQSIFFYEFPYSSNHFLQTVLPTLKHSLSLTLQHFFPFAGNLVFPFQPHFPYILYSEGDSLFFTVAESTIEFPCLIGDTARDVRDLHPSVPVLPTPGTKEDGTCSSPLMAIQVTIFPNYGFSICMTFRHVIADGRAFLHFMKYWSYVCRTRSDLASLEGSQASPLHNRDIIEDHKGLKLIFLEELWNLPTEGIKKLADPIPNVINNNEKVRVVFMLNSDHVEKLKKLVSSECKSYGFESLHISTFVVTCSLMWVCKVQSEEASARTIPKNDEIYKLAFLADCRNRLQFSIPSTYFGNCIVGHMVSHKRSKLVGGNGIVEAAIAIGRKVRDFQFDALRGVEGFMADGKEIEQSGEHVITIAGSPKMGAYEIDFGWGKPKKCEILHIEYSGTISLSDCRDDEGGVEVELVLGRVQMSNFSTILEDYLRNLLVVT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2135 477 Gene3D - 10 240 IPR023213 -
Ssu8g2135 477 Pfam Transferase family 11 464 - -
Ssu8g2135 477 PANTHER - 9 473 - -
Ssu8g2135 477 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 9 473 - -
Ssu8g2135 477 Gene3D - 250 474 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2135 Ssu-Chr8 56069876 56071309 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2135 48 466 Monolignol Biosynthesis Gene Families AT5G48930 24.368 3.16e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2135 - - gmx:100797080 625.165