Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2097 ATGCATGCCAAAGGTTCTAATCTTGGGAATACCCGCGGACAAATACCAGGAAATTCTTCATCATTTGTCCCAAACCTTCCTCCGCAGATAGGTCTTGATTTAAGACATCAATATAATGTAAACAATCAAGTTGGGTACTTCTCAGACTGGCGCAAGGATCCTGGAATCAGCCACTGCCGTAATTTgattagaaataaaatTTCTGCAATTTTCAGTTACCGATTTCATTATGAGCAAGAACAGGCATCTGTTAAAGCAAATATTCTGGAAAACTGGCTATTTATTGATGCTGCTTCGCAGGAGGAGTATATGAACCAGGGGACATTGATGAAGCGATTGGAAACACAACTCAATAAGTTGCATGCGACAAAATGCAATCAACAAGTTGATTGCTCTATTACTTACTCATCTAAGATGATGGTGCCCTCTTCTGGGTTATTGCATGCTAGGTCTAATAGAAGTGTACTGGAACCTGCTTTTCAGAAAGTGGCTGGTCCTATCAATAATGCAACTGATTATTGTGCAGTGGCTGTAGATAATAAATATGGCTTCCCAAAAGGAGGGCTATCTCATTCTTCCATTGTTCCCGAGCCGGTTTTTTCACCTGATAACTGTTCGTCAATCACTACATGCACTGATATGGATGTGCTTTCTAACTTTTCTGTTTCTGGTGGGGGAAGCAATCTGGAAGCTAGCTCCAAGTCAATTTGTTCCTATTTTCCTCAGCAACAGGCAGACAATTGGGAGATGAATCTGATAAAGTATGGAGATTGTTCTGGGGCTATGCAGAAAAATGATTCAATGGCTTTTATTACTACAATGGGAAAATCCCTCCAATCTGAATCTTCAAATTTGCTGATCCCTCAACATGTCTCAAGGGAATTTTCAGAAGTTTCCAGTGTTTTTCCTGGTTTGAGCAGCCTTGGACATGTAAGGCAATATCAACACCAGAAGCTGGATTTTCAACAGAATCTTGAACATTTTATGCAGCCATATGTGCTTCATGGTAAAACTTATATGGCCCAACCTAATTCATGCTTTGTCAATCAAGGTGAACATTGCCATCAAATGTTGGGGCAGAAAACATTGAAACAGCAGCAGCTTTTTACAAGTCTCAATGGGGATGAACAGTTCACTTCAGAAAGCTCAGCATATCTTTTTGGTTCAGATGGATCTGCCAATATGAATTCATGCAGTAGTTCTAAAGTTTCAGTTGAACAGAGGATACTGCTTGAATATTTTTACTACAAGAATTTAAACATTGTTTCACGggataatgttattaaatatctGCATTCAACAGTTTGTTGTAAGGGGATATGTAATTGTGAATGGAATAGCAAACTGTTATTGCATTTTGATAACTGTCAAGGTGATGATTGTCATATATGTTACTCCTGGAAATTGTGTGGCACTGATATTCTTGAGCGTCATTTGGAATTTCCGAATAGCGTAATTAAGGGTTCTGTTGTAAGAAAAAATGATGCCCCTTCTGGTAATTCTGAAGCCATGCTACCACCtgccaaaagaagaaaaacggAGTCTGCTTTTGGTGtctctttaattaataatacaagttTGGATCGGTTGACTCACAAAATGGTTCAACCTTGTTCTTCTGAAGCACTTTCACAATTGCAGCAACAGCCAGAATCTCCCCCCTCTTCTGGAGTTACAGAGTGCAATGTGGAGCAATTTACAAATCCAATGCTTGATTCGATAAGCAATAGTGAGAAGAAGAGCAATGTGATTGattataaatttgggcagacTTTCAAGAATGAAACAATTATCTCTAAAAGCTTAGAAGCTGATCATATATCAGAGGAACCAGACCCCAAAAGCCATGATGTGAATGCCAGCAGCAACTTTGAGGACACTGTCATTAGATTGAATTCCAATATGCCTACTCTCTGCAAAGAACCTATGCCTGCAGATATAGAGGAACCAGACCCCAAAAGCCATGCTGTGAAAGCCAGCAGCAAATTAGAGGAAACTGTCATTAGATCGAATTTCATTGTGCATACTCTCTACAAAGAACCTATGCTTGCAGATATAGAGGAACCAGACCCCAAAAGCCATGATGTGAAAGACAACAGCAACTTAGAGGAAACTGTCATTAGATTGAATTCCAATATGCATACTCTCTACAAAGAACCTATGCCTGCAGATATAGAGGAACCAGACCCCAAAAGTCATGATGTGAGAGCCAGCAGCAACTTAGAGGAAGCTATCATTAGATCGAATTCCGATATGCATACTCTCTGCAAAGAACCTATGCCTGCAGATATAGAGGACATACATGGCAGAACCAGATTCAGCCAGGATGGGATAAATGCTGCAAAGAAAGTTGTTGAGGCAAAAGCTGATCAAGAGAAGGAAACAAAGTCCCCAAATCCAACACTTAATACTGTTTCCTTAACTgattttttcacaattaatcaaaTAAGGGAACACATTAAAAGTCTGAGAAAGCAATTTAATGAGAGTACAACGGTTGAAGAACCAGGAATTGATGTTTACAAATGCCAATTATGTGCAATGGGAGCACTTTCTTTCGCCCCCGTGCCAATTTATTGCTTTTGTTGCGCCATCCGCATCAAGCGAAATGCATGCTATTACtatagaaaagaagaagatggtACACAACATTGCTTTTGCACTGTGTGCTATAAGAATTCTCGAGGTGGGATCATCACATTCAATGGGACATCTGTTTCCAAGACAGATCTtgataaaaagacaaataatagaGAGTTTGAAGAAGCGTGGGTTGAATGTAATAAATGCAAAAGTTGGCAGCATCAAATATGTGCACTCTATAATGATAAAAGAGATTTGGACTACAGTGCTGAGTATACATGTCCTATATGCCGCTTAAAGGAAATTAGAAATGGAATGCACGTACCCTTACCGAAGACTGCTATGTTTGGTGCTAAGGACTTGCCAAGAACCATGCTTAGTGACCACATAGAGAAGAGACTTTTTAAGCGTCTCATGCAAGAGAGTGAAGATTGGGCAAAAGTTGAAGGGAATAAGAATCTTGATGAGGTTTTAGTAGCAGAAAATCTTTCTGTTAGAGTAGTGTTATCGGTCGACAAACAATTGAAAGTGAAGAAACAGTTTCTGGACATCTTTGTGGAGGAGAATTACCCGGCTGAATTTACTTATACATCAAAAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGTAGATGTATGCCTTTTCGCAATGTATGTCCAGGAGTTTGGCTCAGAATGTGGCTATCCAAATCAGCGTTGTGTATATATTTCATATCTCGATTCTGTTAAGTATTTTAGGCCTGAAAGAGAGACTATGAGTGGAGAAGCTCTTCGTACCTTCGTTTACCATGAGATATTGATTGGATATCTTGATTTTTGCAAGAAAAGGGGTTTCACAACTTGCTATATATGGGCCTGTCCACCTGTAAAGGGGGAAGATTATATACTATATTGTCATCCTGACACTCAAAAAACTCCGAAGAAGGATAAACTACGGCACTGGTATCATTCAATGCTAAGAAAGGCTGCTGAAGAAAATATTGTTGTTGGTTTAACCAACATATATGATCATTTCTTTGTTCCTACTGGAAATTGCGACTCCAAGGTAACAGCTACTAGTTTGCCTTACTTTGATGGAGACTTCTGGTCTGGTGCTGCTATGGATAAAGCCAGGATCATTGAACAAGAGAGTGGAGGAGAGTATGAAAGTATGTTGAAGAAACTAGTAACAAAAAGAACTTTAAAGGCCATGGGACATGTAAATCCTTCAAAAGGAACTGCCAAAGACATTCTAGTGATGCAAAAATTGGGACAAACCATATTTCCGTTCAAGGAAGATTTCATCATAGTTCAATTTCAGTATGTTTGCATACACTGCCATGAAGTGATAGAGTCTGGGAAGCGATGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTGCTGACTCACACACTTCTGTCAATGGTGATAAGCATACACTTTGTCAGGTCCTCATGGATGACATCCTTTGTGATACTAAGGAGAATGATATCATCCTTGATAATGGGTTATTTGATACCAGGCATAACTTTTTGAGCTTCTGCCAAAGGAATAGGTTTCAGTTTGACTCACTCCGCCGAGCCAagtattcctcaatgatgatccTCTATTTTCTAAAGAATCCTACTCTGCTGACTGTTGGAACAATGTGCAGCATTTGCTGTAAAGACAATGTATACCAGTGCTACTGGAAATGTGAGAATTGCCCAGAGTTCATTGTCTGCTCTGCATGCTATAACGAGAGAGGTGCTAATTGCCATGCACACACGTTGAGTCAAACTTGTTCAACAACACAATGTCCTTCAGGGAATCAAGAGTTAAAGCAGAAGTCGGTACTGATGCAGGAACTGCTGGATGTTATAAAGCATGCATCGCAATGTCACTCAACTAAAACTCAACCATGCACTTACCGACACTGCCTTCAAATTAAAAAGCTGTTCTCTCATGCCAGTAGGTGCACTATTCGAGTTTCTGGGGGATGCCAATATTGTAAGAAGGTTTGGCAGGGACTAGCAATACACTCAAGGCATTGTAGAGACTCAGGATGTCGCATCCCCCGTTGCATGGATCTGAAGAAGCAAGCAGAATGGATAGCAACGCAATCTGAATCGCGGCGTAGAGCTGCATATGCAGAAGGCTGCAGAGAACTCTCTgttcattga 4740 0.3884 MHAKGSNLGNTRGQIPGNSSSFVPNLPPQIGLDLRHQYNVNNQVGYFSDWRKDPGISHCRNLIRNKISAIFSYRFHYEQEQASVKANILENWLFIDAASQEEYMNQGTLMKRLETQLNKLHATKCNQQVDCSITYSSKMMVPSSGLLHARSNRSVLEPAFQKVAGPINNATDYCAVAVDNKYGFPKGGLSHSSIVPEPVFSPDNCSSITTCTDMDVLSNFSVSGGGSNLEASSKSICSYFPQQQADNWEMNLIKYGDCSGAMQKNDSMAFITTMGKSLQSESSNLLIPQHVSREFSEVSSVFPGLSSLGHVRQYQHQKLDFQQNLEHFMQPYVLHGKTYMAQPNSCFVNQGEHCHQMLGQKTLKQQQLFTSLNGDEQFTSESSAYLFGSDGSANMNSCSSSKVSVEQRILLEYFYYKNLNIVSRDNVIKYLHSTVCCKGICNCEWNSKLLLHFDNCQGDDCHICYSWKLCGTDILERHLEFPNSVIKGSVVRKNDAPSGNSEAMLPPAKRRKTESAFGVSLINNTSLDRLTHKMVQPCSSEALSQLQQQPESPPSSGVTECNVEQFTNPMLDSISNSEKKSNVIDYKFGQTFKNETIISKSLEADHISEEPDPKSHDVNASSNFEDTVIRLNSNMPTLCKEPMPADIEEPDPKSHAVKASSKLEETVIRSNFIVHTLYKEPMLADIEEPDPKSHDVKDNSNLEETVIRLNSNMHTLYKEPMPADIEEPDPKSHDVRASSNLEEAIIRSNSDMHTLCKEPMPADIEDIHGRTRFSQDGINAAKKVVEAKADQEKETKSPNPTLNTVSLTDFFTINQIREHIKSLRKQFNESTTVEEPGIDVYKCQLCAMGALSFAPVPIYCFCCAIRIKRNACYYYRKEEDGTQHCFCTVCYKNSRGGIITFNGTSVSKTDLDKKTNNREFEEAWVECNKCKSWQHQICALYNDKRDLDYSAEYTCPICRLKEIRNGMHVPLPKTAMFGAKDLPRTMLSDHIEKRLFKRLMQESEDWAKVEGNKNLDEVLVAENLSVRVVLSVDKQLKVKKQFLDIFVEENYPAEFTYTSKVILLFQQIEGVDVCLFAMYVQEFGSECGYPNQRCVYISYLDSVKYFRPERETMSGEALRTFVYHEILIGYLDFCKKRGFTTCYIWACPPVKGEDYILYCHPDTQKTPKKDKLRHWYHSMLRKAAEENIVVGLTNIYDHFFVPTGNCDSKVTATSLPYFDGDFWSGAAMDKARIIEQESGGEYESMLKKLVTKRTLKAMGHVNPSKGTAKDILVMQKLGQTIFPFKEDFIIVQFQYVCIHCHEVIESGKRWFCTECKKFQECERCHTADSHTSVNGDKHTLCQVLMDDILCDTKENDIILDNGLFDTRHNFLSFCQRNRFQFDSLRRAKYSSMMILYFLKNPTLLTVGTMCSICCKDNVYQCYWKCENCPEFIVCSACYNERGANCHAHTLSQTCSTTQCPSGNQELKQKSVLMQELLDVIKHASQCHSTKTQPCTYRHCLQIKKLFSHASRCTIRVSGGCQYCKKVWQGLAIHSRHCRDSGCRIPRCMDLKKQAEWIATQSESRRRAAYAEGCRELSVH 1579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2097 1579 SUPERFAMILY TAZ domain 1468 1552 IPR035898 -
Ssu8g2097 1579 Pfam TAZ zinc finger 1474 1547 IPR000197 -
Ssu8g2097 1579 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 976 1403 IPR031162 GO:0004402
Ssu8g2097 1579 SMART TAZ_2 1467 1548 IPR000197 -
Ssu8g2097 1579 Gene3D TAZ domain 1463 1571 IPR035898 -
Ssu8g2097 1579 CDD PHD_HAC_like 886 958 - -
Ssu8g2097 1579 ProSiteProfiles Zinc finger TAZ-type profile. 1466 1550 IPR000197 -
Ssu8g2097 1579 SUPERFAMILY RING/U-box 1386 1450 - -
Ssu8g2097 1579 SMART KAT11_2 1010 1304 IPR013178 GO:0004402|GO:0006355|GO:0016573
Ssu8g2097 1579 SMART PHD_3 886 959 IPR001965 -
Ssu8g2097 1579 Coils Coil 699 719 - -
Ssu8g2097 1579 MobiDBLite consensus disorder prediction 7 21 - -
Ssu8g2097 1579 Gene3D - 1290 1340 IPR043145 -
Ssu8g2097 1579 MobiDBLite consensus disorder prediction 1 21 - -
Ssu8g2097 1579 Pfam Histone acetylation protein 1015 1224 IPR013178 GO:0004402|GO:0006355|GO:0016573
Ssu8g2097 1579 SUPERFAMILY FYVE/PHD zinc finger 920 961 IPR011011 -
Ssu8g2097 1579 ProSiteProfiles Zinc finger PHD-type profile. 884 961 IPR019787 -
Ssu8g2097 1579 PANTHER CBP/P300-RELATED 745 1552 IPR013178 GO:0004402|GO:0006355|GO:0016573
Ssu8g2097 1579 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 919 962 IPR013083 -
Ssu8g2097 1579 SUPERFAMILY RING/U-box 1272 1338 - -
Ssu8g2097 1579 ProSiteProfiles Zinc finger ZZ-type profile. 1292 1348 IPR000433 GO:0008270
Ssu8g2097 1579 PANTHER HISTONE ACETYLTRANSFERASE HAC2 745 1552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2097 Ssu-Chr8 55000065 55009408 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Ssu8g2097 HAT_KAT11 7.6e-29 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2097 K04498 - gmx:102664049 2024.59