Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2077 ATggaatttaagagaaaaataatactatGCTTACTGATGACCATCACAATGGGGTATTACAAAATTGAAGGGAGAGACCCTATACTGCACAGGGTTGGAGGAGGAAGGTATACGTGGGAACCAAAAGTTAACTTCACAAAGTGGGCGAGTCATGAGCACTTCTACAAGGGTGATTGGCTATATTTTGGTTTTGACAAGCGCATCTACAATGTTTTGGAGgtgaacaaaacaaattatgagCATTGTGTTGACACAGACTTCATAACAAACATCACAAAAGGAGGGAGAGATGTTTTCCAGCTCTTGGAGACAAGGCCATATTATTTCCTATGTGGCAGAGGTTTCTGCTTTCAGGGAATGAAAATTGCAATAAATGTTGAGGAAGAACCCAACCCAGCAGTACCACCAGCAGCACTGCCCAACAAAGCCTTTCCATTAAATAGACTGAGTAATACTAAACTGCTTGTGTTTCTTGTTCTTGTCACAGTTTTGGCATGGACCTTTATATAA 510 0.3804 MEFKRKIILCLLMTITMGYYKIEGRDPILHRVGGGRYTWEPKVNFTKWASHEHFYKGDWLYFGFDKRIYNVLEVNKTNYEHCVDTDFITNITKGGRDVFQLLETRPYYFLCGRGFCFQGMKIAINVEEEPNPAVPPAALPNKAFPLNRLSNTKLLVFLVLVTVLAWTFI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2077 169 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Ssu8g2077 169 PANTHER BLUE COPPER PROTEIN 5 165 IPR039391 GO:0009055
Ssu8g2077 169 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Ssu8g2077 169 Gene3D - 29 135 IPR008972 -
Ssu8g2077 169 PANTHER EARLY NODULIN-LIKE PROTEIN 5 165 - -
Ssu8g2077 169 SUPERFAMILY Cupredoxins 30 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2077 Ssu-Chr8 54264538 54265143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2077 29 135 Phytocyanin Superfamily AT2G27035 65.421 1.25e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2077 - - gmx:100789719 266.929