Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2061 ATGAATTTCCCGAGGAACCTTCCtccttcctcctcctcttcttcgCACATTCCACCCCACCGTACCCAGCTGCACCCTCGCATGATCTCCCCCTACACTTCCACCCCCCCGAGTCCCAAACCCCACTCCCCCAAAtgcctcctcttcttcttcgcCCTCCTCTTCTTCACCGCCCCCTTCCTCTTCTACCTCTTCTCCACCGCCCTCCAAATCCACTCCTCCCCCAAATTCGCCGACGCCCGCCCCTCCTTCTCCGCCCTTGTCCTCCGCGCTGGCCCCGCCGCCCTCCGCCTCTCCGTCTTCCACTTCCTCGGCCCCGGCCTCCTCGCCGGCGCCCACTCCGCCGCCGCCTCCCCAGGCTTCGCCGCTGGCCAGGACGCCGTCCGTGGCGCCGTGGCAGAGCTCGTGGAGTTCGCCAAGGGGAGGGTGCCCCGCAGGGAGTGGGGGAACACCAAGGTGCGGCTGGCGGCCACCGAGGAGCTGGAGGGGCTGGGCGCCGAGGAAGCAGAGAAGGTTCTGGAATGTTGCAGACGGGCTTTGAGGGCGTCCGGGTTCTTGTTCAAGGATGAATGGGCACGCGTCGTTTCGGGGGAAGAACAAGGCATCTCTTCTTGGGTTGCTGTAAATTATGTTCTTGGAAACTTGGGACGCGAACCTCAAGAAACAACTGGAATAGTTGAACTTGGTGGGGCTTCTTTGCAGGTTACGTCAGCCAAACTTAATGCAGATTTAGCTCAGTCTTTGCGGACTATAAGATTTTCTGGGGTAACATACAACCTTTACACTCGGAGTTGGTCCCAACTGGGTCAGGACGTGGTTTGGAAATCATTAGAGGAGCGGCTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCtagcaaaagaaatatatttaatccttgCATTCCTAGAGGGTACGAGTATCCTTGGATCTCTAATGCTAGTTATGTAAAACAACCAATCTTCCAACCAGCTGGAAATTTCTCGTCATGCAGATCTGAAGCTGTGTCATTGTTAAAGAGAACAGAAGATAGATGCCTGCATCCACCTTGTAAAATCACTTCATCCTTTTATGAGTTATTAGGCGAACAAGTTTCTTCAAAAAGCTTCTTGTATACTTCTGAGATTCTTAGGATGGCTCCTAGGACTTCGTTGTTTGAATTGGAGACAGCAGGCCGACATTATTGTGAAGATCATTGGGATACTCTTAAAGATCAGCATAATGAAATTGATTATCTGGATTTATTGAAGTATTGTTTCTCTTCTGCATATATGTTGGCACTATTGCATGATGTTCTTGGGATTGCTCTGGAAGAGAAAAGGGTTGGATTTGGGACCCAGAAGATTAACAGTCATGTTGATTGGACGCTTGGATCTTTCATAATTGAAACAATGGCAGAACCCCTTGAATTGGAACATATAGATACAGGGATGATTGTTGGGAATGAATCAGTCacatacttttcattatttgcatttcttttcttaatctTGCTTGCTGCATTCTTTCTAGTGCAATGGAGAAAGCCACAATTAAAGACGGTATATGACCTTGAGAAGGGACACTATATTGTTACACGTATACCCAGGTGA 1593 0.4708 MNFPRNLPPSSSSSSHIPPHRTQLHPRMISPYTSTPPSPKPHSPKCLLFFFALLFFTAPFLFYLFSTALQIHSSPKFADARPSFSALVLRAGPAALRLSVFHFLGPGLLAGAHSAAASPGFAAGQDAVRGAVAELVEFAKGRVPRREWGNTKVRLAATEELEGLGAEEAEKVLECCRRALRASGFLFKDEWARVVSGEEQGISSWVAVNYVLGNLGREPQETTGIVELGGASLQVTSAKLNADLAQSLRTIRFSGVTYNLYTRSWSQLGQDVVWKSLEERLKYRELKLSSKSSKRNIFNPCIPRGYEYPWISNASYVKQPIFQPAGNFSSCRSEAVSLLKRTEDRCLHPPCKITSSFYELLGEQVSSKSFLYTSEILRMAPRTSLFELETAGRHYCEDHWDTLKDQHNEIDYLDLLKYCFSSAYMLALLHDVLGIALEEKRVGFGTQKINSHVDWTLGSFIIETMAEPLELEHIDTGMIVGNESVTYFSLFAFLFLILLAAFFLVQWRKPQLKTVYDLEKGHYIVTRIPR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2061 530 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 14 526 IPR000407 GO:0016787
Ssu8g2061 530 MobiDBLite consensus disorder prediction 1 20 - -
Ssu8g2061 530 MobiDBLite consensus disorder prediction 1 37 - -
Ssu8g2061 530 Gene3D - 121 458 - -
Ssu8g2061 530 Gene3D Exopolyphosphatase. Domain 2 196 451 - -
Ssu8g2061 530 Pfam GDA1/CD39 (nucleoside phosphatase) family 120 467 IPR000407 GO:0016787
Ssu8g2061 530 PANTHER APYRASE 6-RELATED 14 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g2061 Ssu-Chr8 53763234 53778998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g2061 119 468 Calmodulin-binding Proteins AT3G04080 26.121 6.61e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2061 K01510 - gmx:100806446 807.364