Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g2001 ATGAAGGACCCTTCTCTCCTTCAAGCCACCGGCTCTGAGCCTCTCACCCTCCAACAGGAGTACCACATGCAACTCTCCTGGTCCCGAGACCCTAACAAGGAGACCTTTATTGTACTGGACAAGGACTTGGTTGTTGGCGATTTCTCACACGGGGAACCCCACCTTGAAGCCGTGGTTGGGGATGTAAATATATTCATGAATGATTTGGATAATCCTCACGTGGCAGAGGTTGAAATAATGATAGCTGAACCAAAGAGCCGTAGAAAAGGACTTGGGAAGGAGTCtgttatgatgatgatgaccttTGCTAtcgagaagttaggaattaatatCTTTCGGGTTAAAATTGGAGAATCAAATGGAGCATCCCTTGACCTGTTCCAAAAATTGGGGTTTGTGCAAACTTCATACAGCAGCATCTTCAAGGAGGTCAATTTGGAGTTGCAAATAACACAGCCCAAGAAAGAGGAGATGCTTGGTTTAATGGGTATTGTGATCGAACATACATAA 510 0.4196 MKDPSLLQATGSEPLTLQQEYHMQLSWSRDPNKETFIVLDKDLVVGDFSHGEPHLEAVVGDVNIFMNDLDNPHVAEVEIMIAEPKSRRKGLGKESVMMMMTFAIEKLGINIFRVKIGESNGASLDLFQKLGFVQTSYSSIFKEVNLELQITQPKKEEMLGLMGIVIEHT 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g2001 169 Gene3D - 1 143 - -
Ssu8g2001 169 Pfam Acetyltransferase (GNAT) domain 1 133 IPR000182 GO:0016407
Ssu8g2001 169 PANTHER N-ACETYLTRANSFERASE 9 1 161 IPR039135 GO:0008080
Ssu8g2001 169 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 137 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu8g2001 Acetyltransf_3 3.1e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g2001 K25762 - gmx:100817900 310.842