Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1957 ATGGCTTGTATACAATGGCCACATGAGCAACTTAAAacaactttcttttcttctacttcTCGCCAATATCTTTTCTGCTTTCTTCTTGCTATTGTTGTGTTGGAGCTAGCAAGAAGAGCCAAAATCAAACCCAGTTTCAATCTGCCTCCATCCCCAAAAAAGCTACCAATCATAGGCAATCTTCATCAGCTAGGCACGTTGCCATACCGTTCTTTTAGAGCCCTCTCACAAAAGCATGGCTCTCTGATGATGTTACAGTTTGGGCAGACTCAAGCTCTAGTGGTTTCATCTGCAGATGTGGTCAGGGAAATCCTGAAAACTCATGACATAACTTTCTCAAACCGATCCAAAATCGCAGCAGCCAAAAACTTAGTGTATGGATGTAATGACATTGGTTTTGCATCCTATGGTGAAAGCtggaaacagaaaagaaaaatatgtgtcCTTGAACTTCTGAGCCCCAAAAGGGTGCAGTCTTTTAAACTGATAAGAGAAGAAGAGGTTGCAGAATTGGTTAACAAGATACGTGAAGTAAGTTTGAGTGATACATCATCTGTGAATCTAAGTGAGTTGCTTATTGAAACAGCAAACAGCATCATCTGTAAATGTGCTCTTGGACACAAGTACATTACAGAAGATTATAGCAGCAGGATCAAAGAGCTTGCAAGGAGGGTGATGATTCAACTTGCCGTTGTCACTGTGGGGGATCGCTTTCCTTTCTTGAGTTGGGTTGATTTTCTAACTGGTCAAATTCAAGAATTCAGGGCCACTTTTGGAGCCTTGGATTCCTTATTTGATCAGGTAATAGCAGAGCATAAGAAGATGCAGAAGGAAGCTGACCACTGCTCCACTGAGAAAGATTTTGTGGATATCCTCATCCAACTTCAGAAGGATGGCATACCTGAGTCTGAACTCACCAACAATGACATCAAATCAATTCTATTGgaCATGTTTGTAGCAGGAAGTGATACAACCGCATCAGCACTAGAATGGGCTATTGCAGAGCTCATGAAAAATCCAATGAAATTGAAGAAAGCCCaggaagaggtgagaaaattTGTAGGGCATAAATCGAAAGTAGAGGAAAATGAAATCAACCAAATGGACTACATGAAATGTGTAATCAAAGAAACTCTAAGGTTACATCCACCTGCTCCTCTCTTGGGTCCTAGAGAGACATCATCTCATGTGAAACTCAGAGGCTACGATATTCCAGCAAAAACATTGGTATATGTCAATGCATGGGCAGTTCAGAGGGACCCGGAACTTTGGGAAAGGCCTGAAGAGTTTATTCCAGAGAGACATGATAACAGCCAGGTTCATTTTAAAGGCCAAGACTTACAATTCATTCCATTTGGTTTTGGGAGAAGGGCATGCCCTGGAATGACATTTGGGCTTGTTTCTGTTGAGTATGTTCTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTGCCTGCAACTGACACATCTGGACAAGACATAGACATGAGTGAAACATATGGCCTCATTACATCCAAGAAAGTGCCACTTCGTCTTAAACCAATTCCATTTTCATTTGAATCCAATttctaa 1572 0.3969 MACIQWPHEQLKTTFFSSTSRQYLFCFLLAIVVLELARRAKIKPSFNLPPSPKKLPIIGNLHQLGTLPYRSFRALSQKHGSLMMLQFGQTQALVVSSADVVREILKTHDITFSNRSKIAAAKNLVYGCNDIGFASYGESWKQKRKICVLELLSPKRVQSFKLIREEEVAELVNKIREVSLSDTSSVNLSELLIETANSIICKCALGHKYITEDYSSRIKELARRVMIQLAVVTVGDRFPFLSWVDFLTGQIQEFRATFGALDSLFDQVIAEHKKMQKEADHCSTEKDFVDILIQLQKDGIPESELTNNDIKSILLDMFVAGSDTTASALEWAIAELMKNPMKLKKAQEEVRKFVGHKSKVEENEINQMDYMKCVIKETLRLHPPAPLLGPRETSSHVKLRGYDIPAKTLVYVNAWAVQRDPELWERPEEFIPERHDNSQVHFKGQDLQFIPFGFGRRACPGMTFGLVSVEYVLANLLYWFNWKLPATDTSGQDIDMSETYGLITSKKVPLRLKPIPFSFESNF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1957 523 SUPERFAMILY Cytochrome P450 49 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 Pfam Cytochrome P450 49 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Ssu8g1957 523 Coils Coil 343 363 - -
Ssu8g1957 523 PANTHER CYTOCHROME P450 71B11-RELATED 13 518 - -
Ssu8g1957 523 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 518 - -
Ssu8g1957 523 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1957 523 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1957 Ssu-Chr8 50716351 50798845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1957 27 515 Cytochrome P450 AT5G25180 41.057 7.04e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1957 K20617 - gmx:100785621 862.833