Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1936 ATGGCAGCCTCAGCCTCATCCATGATATCAGCTCCTGCCCTATCCCCCACCATCCAAAAACACCAAAGTCATCATCACCTGAAGCCATCCAACGTGTGCTTTCAGGGTCTGAGACCCCTCACAAGGTCCACAGCATCAACCAAAGTGAGCACCTACACCCCCAACAAAAGGGTTGCTCGTGGTGGTGTGAGAGCTGGACTCAGCGCTCCTCTGGTGATAAGCCTCAGCACCGGCCTTTCCCTCTTCTTGGGGAGGTTTGTGTTCTTCAACTTCCAAAGGGAGAACGTGGCAAAACAAGTGCCTGAGCAGAACGGGCTCACACACTTTGAGGCCGGTGACTCACGTGCAAAGGAGTATGTCAGCCTCCTCAAATCCAATGACCCTGTTGGCTTCAACATAGTTGATGTCTTGGCTTGGGGGTCCATAGGCCATGTTGTTGCTTACTATATCTTGGCCACCACTAGCAATGGCTATGACCCTAAATTCTTTGGTTGA 495 0.5172 MAASASSMISAPALSPTIQKHQSHHHLKPSNVCFQGLRPLTRSTASTKVSTYTPNKRVARGGVRAGLSAPLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTHFEAGDSRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHVVAYYILATTSNGYDPKFFG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1936 164 Pfam Photosystem I psaG / psaK 68 158 IPR000549 GO:0009522|GO:0015979|GO:0016020
Ssu8g1936 164 Gene3D - 69 163 IPR023618 GO:0009522|GO:0015979
Ssu8g1936 164 PIRSF PsaK 1 164 IPR016370 -
Ssu8g1936 164 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 8 163 IPR016370 -
Ssu8g1936 164 ProSitePatterns Photosystem I psaG and psaK proteins signature. 130 147 IPR000549 GO:0009522|GO:0015979|GO:0016020
Ssu8g1936 164 TIGRFAM PS_I_psaG_plant: photosystem I reaction center subunit V 72 159 IPR017494 GO:0009522|GO:0009535|GO:0015979
Ssu8g1936 164 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC 8 163 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1936 K08905 - gmx:100305786 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1936 8 50319790 50320284 Ssu8g1936 8 50319790 50320284 ECH