Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1929 ATGGACAGTGAAAGAGAGGACAACAACCAAGGCATCAATGCAACACACACTGCAATCTCTAGCACACTAAAAATTAAGATTGCAAGCAGCGGCAAACAAGGTGAGGAGAGTTTAGACAACTCAAACTTACCTTCACCAAACATAAACAATGCCATAGAATCATCACCTTATGGTTCTCCTCTTGTGTCCCCACCTTCATCAGCATTTGTTTCAGCATTGCAGTCTCCATATATATCTCCAAGGGCCATAATCCCAGACCCCCCTAACGGATCTCCTTTGGAAAACCAACCACCactaccaacaacaacaacaacaacaacaacctccTCCACCACCAACCCTTCCACCCCAGAAGATGTGCCAAGCAGTTCCTACACTCCCCCTTCTGATCAATATGAGTTCTCTGATGACACTGCTGACACAAGGCTCAAATTTGTGACATGTGTTCCTGAAGCAGCTCCTCCACGCATCTCATTCTCATTTCCAGTTCCTAGAATTTCCTTTGCAAAAGGTCCTGTCTCACCTGCTTCCAATGCCAAACTCAGAAGCTGTGATGTCTACATTGGGTTCCATGGCCAGAACCCCAACTTGGTGCGCTTTTGCAAGTGGCTTAAGTCTGAGCTTGAGCTTCAAGGGATTGATTGCATGCTTGCTGATAGAGCAAAGTACTCAGATACTCAGAGCCATGAGATTGCTGATAGAGTCATTTGCTCAGTGGCATTTGGAGTGCTGGTTGTCACAAGTTCCAGCTTCCTCAACCACTTTAGCATGGAGGAGGTGAGATTCTTTGCTCAAAAGAAGAACTTGATCCCCCTCTTGTTTGACACAGGACCTGCTGAGATTATGGCTCTTCTTAACTGCAACTCTATTGACAAAGAATGCAAAGAGGCAATTGATGGACTAATGAAGTGCAGTGAATTCAATCTAGAGGCTAATGATGGTAATTGGCGAAGCTGCATAGCGAAAGCTGCTGGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGCTGAGCAGAAGGATAATATGAAAGGATTTGAGAGCTTACCTTTTCCAAGGAACACATACTTTGTAGGAAGAGAGAAGGAGATCATGGAGATTGAAGGTCTTTTTTTCGGTCGTGGGAATTTTATGGAACAAGTCCAAGATCATTGTAGGACATTCATCAAAGGAGAAGCCAGTGGAAGTGGACAATCTGAAGGCCTTGCAGATGAGGAAAGTGAACCAGTGATAGATAGGTGTGGGAGGTATATTAGTCTAGAGATGGGGAGGAGCAAAGAACCAACTTTAGAGGCATGGGTTGAACCAATCATGGGAAACAATTCTTTGAAGAGGTTGAAGAATAAGAAGTCAAAGAGTGGAAACTACAAGAGCTTGTGTAGCAGTGTGATTTGCATTAATGGGGTTTCTGGGGTTGGAAAGTCTGAGCTGGCACTGGAATTTGCTCACAGATATCACCAGAGGTACAAAATGATCTTGTGGGTTGGTGGTGAAGCCAGATATCTTAGGCAGAACTTATTGAACTTGTCCCTCAATTTGGGATTGGATGTTGGTGCTGATTCTGAGATCGAAAGGGGTCGGATTCGTAGCTTTGAGGAGCAAGAATTTGAAGCATTCAAGAGAGTCAAGAGGGAACTGTTTAGTGAGACTCCTTACTTGCTGATAATTGATAATCTTGAGACAGAAGTGGAATGGTGGGAAGGGAAGGATCTATATGACTTGATACCAAGAAACACAGGAGGGACACATGTGATTGTTACTACTAGGTTGTCCAAAGTAATGAGCTATGATACTATTCAGCTTCCACCTTTGCCATTATCTGATGCAATGATTCTGATGGtaggaagaaaaaggagagactATCCAGCAGATGAGATAGACTTCCTTGAAAAAATCAATGAGAAACTTGGAAGGTTGAGCTTTGGTTTGTGGATGATTGGTTCATTGTTGTCTGAACTTGCAATAGGCCCTTCTGCTCTCTTTGAGGCCATAAACCAGGTGCAACTCAATGAAGATTCAAACACTAGCTATATGAGCATCGCAGAAGGGCAATGGTGCAAGAGCAACCCTTTTCTCATGAAGACCCTCCTCTTTTGTTTGGAAACTTTGGAGAAAACTAAAGCTAAAGAGAACCTCTTGGCCATAAGAATGCTGCTTGTAAGTGGGTGGTTGTCCCCTGCTCCCATTTCAGCCAGTTTATTAGCCAATGCAGCAAAGAGTATCCCTATGGTTGAAAACCGTCTCAAGAAGTGGACCAAATATCTGAGCCTAACACCTAGTTGTTTATCATCGCGGACATGGAAAAACGAAGAAGATTCAGCAATGCTTCTTGTGAAAATGGGACTGGCTAGAAGGGCTAATCAACATGATGGATGTTGGCTTCATTTCCATCCCATAACACAAGCATTTGCCAAAAGAAAAGGTGGTTTGCAATATGCCGAGGCTGCAATTCAAGGAGTGAGAAAAATGGGCAGCCATGTAAACTCAGATCATTCATGGGCCTCAGCTTTCCTTGTGTTTGGGTTCAAATCTGAGCCCCCACTTGTGCAGCTACAGGCAGTTGACATGGTATTGTACATCAAGAGAACAGCTCTCCCCCTAGCAATTCAAGCCTTCACCACTTTCTCAAGATGCAATTCAGCCTTGGAGCTCTTGAGGGTATGCACCAATGCCCTGGAGGAAGTTGAGAAGTCCTTTGTCTCTCAAATCCAAGATTGGTCCCATGATTCTATTTGTTGGAAAAGGAGACTGCAAAGAGGTCAAAAAGTGGATGAATATGTGTGGCAGGATGTCACCTTGTTGAAGGCAACACTCCTGGAGACAAGAGCAAAGTTGCTAGCAAGAGGGGGGCATCTAGACAGTGCCAAGGAACTGTGCAGAACATGTATCAGTATCAGAACTGTGATGCTTAGCCATAACCATGCACAGACCTTGGCTGCTCAAGAGACATTGGCAAGGTTGGTGAGAATGAGGAGCAAGATATGA 2982 0.4333 MDSEREDNNQGINATHTAISSTLKIKIASSGKQGEESLDNSNLPSPNINNAIESSPYGSPLVSPPSSAFVSALQSPYISPRAIIPDPPNGSPLENQPPLPTTTTTTTTSSTTNPSTPEDVPSSSYTPPSDQYEFSDDTADTRLKFVTCVPEAAPPRISFSFPVPRISFAKGPVSPASNAKLRSCDVYIGFHGQNPNLVRFCKWLKSELELQGIDCMLADRAKYSDTQSHEIADRVICSVAFGVLVVTSSSFLNHFSMEEVRFFAQKKNLIPLLFDTGPAEIMALLNCNSIDKECKEAIDGLMKCSEFNLEANDGNWRSCIAKAAGILRARLGRKNAEQKDNMKGFESLPFPRNTYFVGREKEIMEIEGLFFGRGNFMEQVQDHCRTFIKGEASGSGQSEGLADEESEPVIDRCGRYISLEMGRSKEPTLEAWVEPIMGNNSLKRLKNKKSKSGNYKSLCSSVICINGVSGVGKSELALEFAHRYHQRYKMILWVGGEARYLRQNLLNLSLNLGLDVGADSEIERGRIRSFEEQEFEAFKRVKRELFSETPYLLIIDNLETEVEWWEGKDLYDLIPRNTGGTHVIVTTRLSKVMSYDTIQLPPLPLSDAMILMVGRKRRDYPADEIDFLEKINEKLGRLSFGLWMIGSLLSELAIGPSALFEAINQVQLNEDSNTSYMSIAEGQWCKSNPFLMKTLLFCLETLEKTKAKENLLAIRMLLVSGWLSPAPISASLLANAAKSIPMVENRLKKWTKYLSLTPSCLSSRTWKNEEDSAMLLVKMGLARRANQHDGCWLHFHPITQAFAKRKGGLQYAEAAIQGVRKMGSHVNSDHSWASAFLVFGFKSEPPLVQLQAVDMVLYIKRTALPLAIQAFTTFSRCNSALELLRVCTNALEEVEKSFVSQIQDWSHDSICWKRRLQRGQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSAKELCRTCISIRTVMLSHNHAQTLAAQETLARLVRMRSKI 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1929 993 Gene3D - 436 599 IPR027417 -
Ssu8g1929 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 670 IPR027417 -
Ssu8g1929 993 MobiDBLite consensus disorder prediction 96 134 - -
Ssu8g1929 993 Pfam NB-ARC domain 442 594 IPR002182 GO:0043531
Ssu8g1929 993 PANTHER DNA REPAIR PROTEIN RADA 17 993 - -
Ssu8g1929 993 SMART AAA_5 459 617 IPR003593 -
Ssu8g1929 993 Gene3D - 169 298 IPR035897 -
Ssu8g1929 993 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 17 993 - -
Ssu8g1929 993 MobiDBLite consensus disorder prediction 80 134 - -
Ssu8g1929 993 MobiDBLite consensus disorder prediction 81 95 - -
Ssu8g1929 993 MobiDBLite consensus disorder prediction 27 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1929 Ssu-Chr8 50221024 50224005 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1929 - - gmx:100781208 1791.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1929 8 50221024 50224005 Ssu8g1929 8 50221024 50224005 ECH