Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1928 ATGCAGGCTCGACAACGCAGTCCGCGAGGGTTTTACGCGTCGGAGTACCGGCAGCGCGACGCCGGGTTGGGGAGAGGCCGCAGGGGCGACATTTTCGTCGAGGCGGGGCGTCTCGCGGCGGAGTATTTGGTTTCCCAGGGGCTGCTGCCGCCGAACGTGCTGCCGTCGAAATGGCAGAACCACAAGGCTCCGGCGGAGGGCGGCGGGAGGCCGTCGGCGCTCGCGCGGCTCGGGAGCACGGACGGGCGGAGGAAATTGGGGTTTGAGGAGTTCGGGCAGAAGGGGAGGAGGAGGGGGAGTTTCAGCAGGAGCAATGGGTTGGATTGGGGGAGGGAGTACAGGAGGAATGGATCTTGGTCTGATCGGTTTCGCGGCGCCGCTGATGTTAGGGATGGTGAGGATGATGACTATGATGGTGGTGGATTTAGTGTTAGACACCATGATGAGGAGGACCAGCACCAGTACCAGTACCAGCACCCGCACCAGCATCAGCAAGTTGGTTATGTGGATGATGCTTTGATGAAATCGAATTCCAATTCGAATGAAATTGCGTCAAGAAGTGAGGATGGTGGTGATTTGAGTGATAAGGATAGGGATAGGGTTAATGCTGAATTGTTGGAGGTGAAGCAAAGTGGTGCAGGGAAAGATGTGTGTGATGTGGATATAGAGGTTGGTGTTGGCAATGATTTGGAGAATGTGAGTGTTGGGGTTAAGGAGGTGAAGGACGGTGGTGAcaataatgaaaatgagaaattgAGGAATTTGTCTGCGCAGTTGAGTGATCAGGAGAATAGTAGCTCTGGTCGGGTTATTGCTGATTTGGTTTCTCTGTGCAAGTCTGTTAAGGTGCCCACCAAGACGCGCTCTTCAGTTGTGCGCAAGAATTTGAAGTCTGGGAACAGTGGAGATGGGAGTGCACATGATGTTGGGGATCTTCGAGGACCTGAAGAAGTCTTGGCTGAAAATGAGTCCGTTAAAGGCTCCTCCTCAGGTGATTTGCTAGCTGAGAAAAGCTTTGATTTAGTACATGTTGATGCGGATGTTGAGGTACAACCTGTTTGCGCTGCTGAGGATGTGAAAGAATTAGATGCTGTGTGTATAGCCGAGGAAGTTCAATCTGTAGGATGTCAATCTGGTCAGGATAGAGGTTTTATGCAGGACAACAACCAAGAGTCAAGTGCTACGCCGCCGGAGTGTGGAAGTTGCAGTTCCTTGACTGAGGAACGGGGTGAAAAGCGTGTTGCGGAAGCTGATGATGTGAGGGAGGACAACAAGAGACTGAGAGAATGGCTGCCTCCCCTTGTCCAAAAGACTGAGGGGTACTTTATGCATAGTGACCCAATTGAAGTGAAGGAGAGCCCGGGAGAAGATGAGATTTCACATATTGACAAAGTGACTATGACTTCTGATCAGGGGAGCCTAATGAGTAGTGGTACTCAGTTCACAGAAGGTGGAGACAGACCCTTTCTTCAATGTTCAGAGGAGAAACCAGCATTGCCAAGTTCATTTAGAACTTGTGATCTGAATCTCATTGAAGCGTCTGAAGTGCATGAAAATCATGTTGATCATCCAGTTCTTATCTACCCCCCTGCAGTTTCTGAAGCAAAGAAAGCTGTGCCAATTGACATAGATCTGACCATGAGCCATCCTAGTGTATCAGGCAAATTCAATACTCATGCAACAAGTGGCAAAGAGATTGAAgtaattgatttagaaaatgattCCATTCAAGAAGAAAAGTCAATTGACAATATGGTTAGAAAGACGGAGACTATGTTTCCTGGCCTTGAAGGTTTTTCCAACCATGCTCAAAATGCTGCTGACATACATGATGTTCAGGATGGATATGGGCTCATGATATCGGAGTTGCTTGGGCCAGATTTCACCAACTGTTCTTCAGTACCTGGTGACATAAGTTCTGTGCACAATGAAATGGGCCTTCATAGTGGAACGgGGACACTTGTTGAGGATGATTCCATATATATGTCGCTTGGAGAATTAAGGCATACTTCATCAATCTTCATGCAATCACAACCCTCAGCAAAATGGCACTGTAAAGCGTAA 2064 0.4816 MQARQRSPRGFYASEYRQRDAGLGRGRRGDIFVEAGRLAAEYLVSQGLLPPNVLPSKWQNHKAPAEGGGRPSALARLGSTDGRRKLGFEEFGQKGRRRGSFSRSNGLDWGREYRRNGSWSDRFRGAADVRDGEDDDYDGGGFSVRHHDEEDQHQYQYQHPHQHQQVGYVDDALMKSNSNSNEIASRSEDGGDLSDKDRDRVNAELLEVKQSGAGKDVCDVDIEVGVGNDLENVSVGVKEVKDGGDNNENEKLRNLSAQLSDQENSSSGRVIADLVSLCKSVKVPTKTRSSVVRKNLKSGNSGDGSAHDVGDLRGPEEVLAENESVKGSSSGDLLAEKSFDLVHVDADVEVQPVCAAEDVKELDAVCIAEEVQSVGCQSGQDRGFMQDNNQESSATPPECGSCSSLTEERGEKRVAEADDVREDNKRLREWLPPLVQKTEGYFMHSDPIEVKESPGEDEISHIDKVTMTSDQGSLMSSGTQFTEGGDRPFLQCSEEKPALPSSFRTCDLNLIEASEVHENHVDHPVLIYPPAVSEAKKAVPIDIDLTMSHPSVSGKFNTHATSGKEIEVIDLENDSIQEEKSIDNMVRKTETMFPGLEGFSNHAQNAADIHDVQDGYGLMISELLGPDFTNCSSVPGDISSVHNEMGLHSGTGTLVEDDSIYMSLGELRHTSSIFMQSQPSAKWHCKA 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1928 687 PANTHER PROTEIN, PUTATIVE-RELATED 8 666 IPR040276 -
Ssu8g1928 687 MobiDBLite consensus disorder prediction 59 79 - -
Ssu8g1928 687 Coils Coil 245 265 - -
Ssu8g1928 687 MobiDBLite consensus disorder prediction 382 421 - -
Ssu8g1928 687 MobiDBLite consensus disorder prediction 405 421 - -
Ssu8g1928 687 MobiDBLite consensus disorder prediction 382 402 - -
Ssu8g1928 687 MobiDBLite consensus disorder prediction 88 107 - -
Ssu8g1928 687 PANTHER PROTEIN, PUTATIVE-RELATED 8 666 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1928 - - gmx:100788157 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1928 8 50197271 50205660 Ssu8g1928 8 50197271 50205660 ECH