Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1903 ATGGTAATGGCATTCCTATCTCATTTTTCCCCATACCCAATAATTCTCTCGATTTTTGCCAAGTGGACCACAGGGCTCCCTTTTCTTGCTTCTCTCTGCGCTCCACATCGCCTGCGCAGTCGTCGCAAGCCCCACGAATTTCATCAAGTCCTCTTGCAGCGCCACCCAGTACCCAGCCCTGTGCGTGGAGTCTCTCTCGGTCTACGCCTCCTCCATCCAGCAGGACCCTCAGCAGCTGGTCCAGACCGCCCTGTCCCTCAGCCTCAACAGGACGGAGTCCACCAAGGCCTTCGTGACCAAGTGCAACAAGTTCAGGGGCCTCAAGCCGAGGGAATACGCCGCCCTGAAAGACTGCGCCGAGGAAATCAGCGACGCGTGGACCGGCTCAGCCGCTCGCTCAAGGAGCTCAAGCTCTGCAAGGCCAAGGGCGAGGACTTCGCGTGGCACATAAGCAACGTGGAGACGTGGGTCAGCGCCGCCCTGACCGACGAGAGCACCTGCGGGGACGGGTTCGCGGGGAAGGCGCTGAACGGGAAGATCAAGGCCTCGATTAGAGCCAGAATGCTGAATGTTGCCCAGGTCACCAGCAATGCGCTCTCGCTCATCAACCAGTACGCTGCGAAACACTGA 630 0.5937 MVMAFLSHFSPYPIILSIFAKWTTGLPFLASLCAPHRLRSRRKPHEFHQVLLQRHPVPSPVRGVSLGLRLLHPAGPSAAGPDRPVPQPQQDGVHQGLRDQVQQVQGPQAEGIRRPERLRRGNQRRVDRLSRSLKELKLCKAKGEDFAWHISNVETWVSAALTDESTCGDGFAGKALNGKIKASIRARMLNVAQVTSNALSLINQYAAKH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1903 209 MobiDBLite consensus disorder prediction 72 125 - -
Ssu8g1903 209 MobiDBLite consensus disorder prediction 93 107 - -
Ssu8g1903 209 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 126 209 - -
Ssu8g1903 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 126 209 - -
Ssu8g1903 209 SMART PMEI_2 24 201 IPR006501 GO:0004857
Ssu8g1903 209 CDD PMEI-like_3 126 207 - -
Ssu8g1903 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 126 205 IPR006501 GO:0004857
Ssu8g1903 209 Pfam Plant invertase/pectin methylesterase inhibitor 126 201 IPR006501 GO:0004857
Ssu8g1903 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 123 205 IPR035513 -
Ssu8g1903 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 126 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1903 Ssu-Chr8 49609429 49610862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1903 126 209 Carbohydrate Esterase AT3G49220 36.905 5.83e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1903 - - gmx:100305900 158.688