Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1902 ATGGAAGCCACCCCTTTGAAGCTAGCTTCCTACCAAGCTCTCACAATTGTTGTATTCATCCTTCTAGCTATATCTAACATCAGTTCAGCTTGCGAGTACAATTCTACCATCCCCGCAAATTCCACCCAAACCAACACTGATTACACTGCCACCACTCCCTCCAATTATGGAAACACAACCATTCCATCCAATAATACTCAAGCCTTCAGAAACTACATTTTAACCTCTTGCAATTCAACCACATATCCATCAATATGCTACCGCACTCTATCCCCCTATGCTTTAAAAATTGAAGCGAATCCAATGAAGCTGTGCAATGTGTCTCTCTCCCTTGCCTTAGAGGCTGCCAATAGTGCATCCTCCACCGTATCAAAGATTCTGAACACCAACAATTTGACAGGAATTGCGGAACAAGTGCTGCAGGATTGCATTGGCAATGTAAAGGATTCCATTGGTGAACTCAAAGATTCCCTTGATGCAATGGGACATTTGGATGTTGATAGAGAGTTTCAGATTAGCAACATAAAGACATGGGTGAGTGCTTCCATCACCGATGATCAAACGTGCTCTGATGGGTTTGATGAGATGAATGTGGATGCCACTTTGACGGACAAAATCAGAAAGATTGTTTTGGATGTGGCAAGGAAGACTAGCAATGCCTTGTATTTCATCAACAACAATGTTTACTAA 690 0.4217 MEATPLKLASYQALTIVVFILLAISNISSACEYNSTIPANSTQTNTDYTATTPSNYGNTTIPSNNTQAFRNYILTSCNSTTYPSICYRTLSPYALKIEANPMKLCNVSLSLALEAANSASSTVSKILNTNNLTGIAEQVLQDCIGNVKDSIGELKDSLDAMGHLDVDREFQISNIKTWVSASITDDQTCSDGFDEMNVDATLTDKIRKIVLDVARKTSNALYFINNNVY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1902 229 Pfam Plant invertase/pectin methylesterase inhibitor 73 221 IPR006501 GO:0004857
Ssu8g1902 229 SMART PMEI_2 68 223 IPR006501 GO:0004857
Ssu8g1902 229 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 227 - -
Ssu8g1902 229 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 226 IPR006501 GO:0004857
Ssu8g1902 229 CDD PMEI-like_3 75 226 - -
Ssu8g1902 229 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 227 IPR035513 -
Ssu8g1902 229 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Ssu8g1902 229 PANTHER PECTINESTERASE INHIBITOR 4 8 227 - -
Ssu8g1902 229 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1902 Ssu-Chr8 49565181 49565870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1902 73 226 Carbohydrate Esterase AT3G14310 28.750 6.38e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1902 - - gmx:100527443 347.821