Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1868 ATGGGTTCGCTCGAGACCCCTACTGGCGCGGAAAACGGTTCCGCTCCCCTCGCCGGCAACGGAAAATCCCCGTTGGTCGACGGCGTGGAGGCGGCGCCGGAGCCCGACGGGTCGAAGCGGCGGAGATCGTCGGTGCTCCCCTTGGAGGTCGGCACGCGCGTCATGTGCCGGTGGAGGGACGGCAAATACCACCCCGTCAAAGTCATCGAACGCCGCAAGGTTCCCAACGCCGTCCCCAACGATTACGAGTATTACGTCCATTACACCGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGAACAGCTGGATCTTGATTCAGTGGAGGCTGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCGACAGGTTTGAAGATGACCCGCCACCAAAAGAGGAAGATTGACGAGACACATGTAGAGGGACATGAGGAGCTTGATGCTGCCAGTTTGCGAGAACATGAGGAATTtacaaaagtgaaaaatatagcTACTATTGAGCTTGGCAGATATGAGATTGAGACATGGTACTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCACATGAGGAAATGTGATCTTAAGCATCCCCCTGGTGATGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGTTGATGGCAAAAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCAAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGTCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTGAGGAATCTTACAATTTGGCATGTATCCTCACCCTTCCACCTTACCAAAGGAAAGGCTATGGCAAATTTCTAATTGCTTTCTCATATGAACTGTCCAAGAAGGAGGGCAAGGTTGGCACACCTGAAAGACCCCTTTCAGACCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTCTTAGACATTCTGAAGAAGCATAAAGGAAACATTTCTATCAAGGAACTGAGTGATATGACTGCCATCAAAGCTGAAGATATATTAACCACTCTTCAGAGCCTAGAATTGATTCAATACAGGAAAGGTCAGCATGTTATTTGCGCAGATCCAAAAGTGTTGGATCGCCATCTTAAAGCTGCTGGCAGGGGTGGCCTGGAGGTTGATGTTAGCAAATTGATCTGGACTCCTTATAAAGAACAAAGTTAA 1305 0.4651 MGSLETPTGAENGSAPLAGNGKSPLVDGVEAAPEPDGSKRRRSSVLPLEVGTRVMCRWRDGKYHPVKVIERRKVPNAVPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1868 434 Gene3D - 159 215 - -
Ssu8g1868 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 159 430 IPR016181 -
Ssu8g1868 434 Gene3D - 37 158 - -
Ssu8g1868 434 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 25 434 - -
Ssu8g1868 434 SUPERFAMILY Chromo domain-like 41 159 IPR016197 -
Ssu8g1868 434 SMART chromo_7 62 121 IPR000953 -
Ssu8g1868 434 Pfam MYST family zinc finger domain 160 214 IPR040706 -
Ssu8g1868 434 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 158 429 IPR002717 GO:0004402|GO:0006355|GO:0016573
Ssu8g1868 434 CDD NAT_SF 270 328 - -
Ssu8g1868 434 Gene3D - 337 417 IPR036388 -
Ssu8g1868 434 Pfam RNA binding activity-knot of a chromodomain 48 106 IPR025995 -
Ssu8g1868 434 Pfam MOZ/SAS family 219 396 IPR002717 GO:0004402|GO:0006355|GO:0016573
Ssu8g1868 434 Gene3D - 217 429 - -
Ssu8g1868 434 MobiDBLite consensus disorder prediction 1 44 - -
Ssu8g1868 434 CDD CBD_MOF_like 51 120 - -
Ssu8g1868 434 PANTHER HISTONE ACETYLTRANSFERASE 25 434 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1868 4 434 C2H2 Transcription Factor Family AT5G64610 86.636 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1868 K11308 - gmx:100819168 865.914