Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1801 ATGGTTCAAGAAAAGAAGCTAGTGGACGAGGTGTCCGGTTGGCTCAAAATCTACGACGACGGTTCAGTGGACCGGACATGGACCGGACCGGCCCAAATCAAGTTCATGGCCGAACCGGTCCCTCCCCACGAGCAATTCATCGACGGCGTCGCCACCCGGGACGTCGTCGCCACTCACGGCGGCTCCGGCCACCGCATCCGGCTGTACATGCCTGAGAAAACTCCGGAGGACAACCACAAACTGCCAATTCTCATCCACTTCCACGGCGGCGGGTTTTGCATCAGCGAACCGGACTGGTTCATGTACTACCAAGTATACACCCGGTTCGCCCGGTCCACCCGGTCCATCGTGGTTTCCCCGTTCCTCCGCCGAGCCCCGGAGCACCGCCTCCCTGCCGCCATCGACGACGGCTTTGACACCCTCCTCTGGCTCCAGTCCGTGGCCCGGTCCGGTTCACGCGAACCGTGGCTCGAGCAACACGGCGACTTCGACCGGGTTTTCCTCATAGGGGACAGTTCTGGCGGGAACTTGGTGCATGAGGTGGCAGCGCGGGCCGGTTCGGTCAACCTCGAACCGGTCCGGGTGGCGGGAGCAATCCCGGTTCATCCCGGGTTTGTCCGGTCGGACCGGAGCCGGTCCGAGAGGGACATGCCGCAGTCACCGTTTTTAACGTTGGACATGCTGGACAAGTTCCTAGGGCTGGCGCTGCCGGTTGGGGCCACCAAGGACCACCCCATAACGTGCCCGATGGGCGCGGCGGCGCCGCCGCTCGATGGGCTGAAACTGCCGCCAGTGCTGCTGTGCGTGGCGGAGATGGACTTGATCAGGGACACGGAGATGGAGTACTATGAGGCCATGAAGAAGGCCAACAAAGATGTGGAACTTTTTGTCAGCAAAGGGATGACGCATAGCTTTTATCTGAATAAGATTGCTGTGGATATGGACTCCAATGTCAGTGACCAAACAGATGCTCTTATTTGCAGGGTCAAGGAGTTCATTGAGAAGCACTGA 1011 0.6004 MVQEKKLVDEVSGWLKIYDDGSVDRTWTGPAQIKFMAEPVPPHEQFIDGVATRDVVATHGGSGHRIRLYMPEKTPEDNHKLPILIHFHGGGFCISEPDWFMYYQVYTRFARSTRSIVVSPFLRRAPEHRLPAAIDDGFDTLLWLQSVARSGSREPWLEQHGDFDRVFLIGDSSGGNLVHEVAARAGSVNLEPVRVAGAIPVHPGFVRSDRSRSERDMPQSPFLTLDMLDKFLGLALPVGATKDHPITCPMGAAAPPLDGLKLPPVLLCVAEMDLIRDTEMEYYEAMKKANKDVELFVSKGMTHSFYLNKIAVDMDSNVSDQTDALICRVKEFIEKH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1801 336 PANTHER ARYLACETAMIDE DEACETYLASE 3 334 - -
Ssu8g1801 336 SUPERFAMILY alpha/beta-Hydrolases 6 335 IPR029058 -
Ssu8g1801 336 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
Ssu8g1801 336 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 334 - -
Ssu8g1801 336 Gene3D alpha/beta hydrolase 6 334 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1801 Ssu-Chr8 46438726 46439736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1801 7 334 Carbohydrate Esterase AT5G16080 32.641 3.33e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1801 - - gmx:100806530 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1801 8 46438726 46439736 Ssu8g1801 8 46438726 46439736 ECH