Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1799 ATGGGTTCCAATTTGTTTGgtaaaacagtggaagaatggAAATCTGCACTGGGAAAATATGAAAAGATTCCCAATCAAGAGGTTCAGAATGTACTTAGAGTGACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATATAGCATGTTTCTTCAAGGGGGAGACAATGGAATATGTAGAAAAGACACTGCAAGCTTGTGGTTTCTATCCAAAATTTGGTATTAGTGTACTTGTTGATAGATCTCTTGTTAGTATTGATGAATATAATAGATTGAGAATGCATGATCTGATACAAGACATGGGTAGGGAAATTGTTAGAGAAGTTTCACCATTAGAGCCTGGTAAGAGGAGTAGACTATGGTATCATGAAGATGTTTTTGAAGTACTCTCTGAAAATACGGGGACTTACAGAATTCAAGGCATGATGGTGGACCTCCCTGATCAATATATGGTACACTTGAAGCATGATTCCttcaaaaagatgaaaaatcttaaaattcttaTCGTTCGAAATGGACACTTTTTTGGAAGCCCCCAACACCTTCCAAACAACTTAAGGTTGCTTGACTGGATGGAATATCCTTCATCATCTTTTCCATCTAGTTTTCAGCCAAAGAAGCTTGTTGTCCTCAACTTGTCTCGCAGTCATTTTACAACGCAAGTGCCATTCAAGTATTTGGATTCTTTGACTTCTATGGACTTGAGCTACTGTGAATTATTGACAAAACTACCTGACATTTCTAGTGTCCCAAATTTAACAGAACTAAATCTTGACTATTGTACAAATTTAGAAGAGGTTCATGACTCTGTTGGATTCCTTGAGAAACTTGTTGAGTTGAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCACATGCCATGAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTCCCTGCTATTTTGGGGACAATGGATAACCTCATATCCATTTCTATAGAAGGCAGTGGTATACAAGAATTGCCTCCTTCCATTGGAAACCTTGTTGGACTTCAAGAATTAAGCATGACATCTTGCTTAAGCCTCAAGGAACTGCCTGACAACATTGATATGTTGCAAAATCTTAGAAACCTTGATATTGAAGGCTGTCCACAACTTCGAAGTTTTTTGACAAAGTTGAGAGACATGGGACAATCTACCCTTACCTTTGGTAACATTCAGTCACTGAATCTAGAAAACTGTGGCCTTATAGATGAAGATCTTCCCATAATTTTCAACTGTTTCCCCAAATTAGCATCATTAGTCCTTTCAGGAAGTAAGTTTGTAGCTCTTCCAAGCTGCATACAAGAATTTCCTTGCTTGGAATTACTTCACTTGGACAACTGCAAAAATCTCCAAGAAATTCAGGGAATTCCTCCAAACATACAGTACATTAATGCAAGAAATTGCACATCATTGACTGCAGAGTCATCAAACTTGTTATTGAGCCAGgaaACTTTCGAGGCATGTGAATTACAAGTTATGGTGCCTGGAACAAGGGTTCCAGAATGGTTTGATCACATCACCAAAGGAGAATATATGACATTTTGGGTACGGCAAAAATTTCCAGCAATTATCTTATGCTTTGCTCTTGTGGTAGAGAGTGAAATGAAGGAGAGTTTAAATTGTGGAATCCGCTTCTATATAAATGGTGATGAAGTTTATGAATTGGAAATTCCAAGATGCTTTTCAGATATGGTGACAGATCATGTGTGGCTGTAtgacttaagaactcatccatCCATCCAGTGGCAAAGGCTTGATTTATATCTGATGGATGACTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGACTGTGAGTTGGTGTGGAGTTCATGTCATTAAGCAAGAAGCTAACATTAAGGATATACTATTTACAGATCCTGATCTAGGTTTAGATTCAAGCAGACACTCTGAGAGGATTGATACAGATTTGGATACAGACACTGAAGAAAGCACAAAGTCAATTGAAGATTCCCAATATTGCAAGAAAGTAGATGATAACTGCTACAATTTCAATAACTTGGAAGGTTGTGAGACACCGGATAGGCAAATAGAGGAGTGGTGGAAAAAATGTAATGACAGAGGAAATACTATAGCTGCATGCTACACTGGCATGGTTCAGAACCAAGATAAGAATTTATTGCATCAACCATTGGATGGTGTTACTAAAGATTCAATGGCTTCATTTTATCTTGGAAACATTGATAGTGTCAAAGGTAAGCCTGAGTTCCATATGGCTTCTAAATCAAACATACTACTTGCTGATCATCCTGTGAAAACCCAACCACAATCCCGAGTCACAAGTCTTACACAAACACCAAATGTTCAGGTAGCAAGGACTTCAGGATCCTTGGACAAAGTTACTAGAGGGGAGCTACCTCAAAACTCCACCTTGGTGCTGCCAACAACCATTGGCTCTTTGAGAAATCAAACCAATTTGACTATAAATGATGCAGACATGGAAGCATTTTATGCTGTTCTGGATGCTGAGACCACCGTGGTATCACTTAACAATGACTCCAGAGTGGTTTCTGAATTGGCCAACAAAATGCCTAGTGAAGAGACCAAGAAAGCATTGAAGACACTTGAAGACTTTGTCTCCAAAGACTTTCCTGTTCTGTTGGGGCCTAGTGAGTACAGTACCATGAAAGGCACCTTAGACTACCTCACCAATTTACCAGCAGAAGATGGAATATCAGTGGAAATAAGATCATTGATAGTAGAAGTTTCAAGACAGTTCACTCACTGGAGTTGGGATTATACATATGAAAGCAAGAAAATAGAGTCTATCACGGCCAAGTTGTTGAAAGCTGATGAACTAGAAGAGGGCTTGAAGCTAATAAGACCCACTTCAAGGAAGTCATGTGCTTGGGAAATGAGTTGTGCAATGAGTTGGCCTATTtggaggaaagaaagaaagaactaG 2982 0.3773 MGSNLFGKTVEEWKSALGKYEKIPNQEVQNVLRVTYDNLEENEKEIFLDIACFFKGETMEYVEKTLQACGFYPKFGISVLVDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLSENTGTYRIQGMMVDLPDQYMVHLKHDSFKKMKNLKILIVRNGHFFGSPQHLPNNLRLLDWMEYPSSSFPSSFQPKKLVVLNLSRSHFTTQVPFKYLDSLTSMDLSYCELLTKLPDISSVPNLTELNLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPHAMRLTSLRSLILNWCSSLQNFPAILGTMDNLISISIEGSGIQELPPSIGNLVGLQELSMTSCLSLKELPDNIDMLQNLRNLDIEGCPQLRSFLTKLRDMGQSTLTFGNIQSLNLENCGLIDEDLPIIFNCFPKLASLVLSGSKFVALPSCIQEFPCLELLHLDNCKNLQEIQGIPPNIQYINARNCTSLTAESSNLLLSQETFEACELQVMVPGTRVPEWFDHITKGEYMTFWVRQKFPAIILCFALVVESEMKESLNCGIRFYINGDEVYELEIPRCFSDMVTDHVWLYDLRTHPSIQWQRLDLYLMDDWNQVEISCEKISGASNVTVSWCGVHVIKQEANIKDILFTDPDLGLDSSRHSERIDTDLDTDTEESTKSIEDSQYCKKVDDNCYNFNNLEGCETPDRQIEEWWKKCNDRGNTIAACYTGMVQNQDKNLLHQPLDGVTKDSMASFYLGNIDSVKGKPEFHMASKSNILLADHPVKTQPQSRVTSLTQTPNVQVARTSGSLDKVTRGELPQNSTLVLPTTIGSLRNQTNLTINDADMEAFYAVLDAETTVVSLNNDSRVVSELANKMPSEETKKALKTLEDFVSKDFPVLLGPSEYSTMKGTLDYLTNLPAEDGISVEIRSLIVEVSRQFTHWSWDYTYESKKIESITAKLLKADELEEGLKLIRPTSRKSCAWEMSCAMSWPIWRKERKN 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1799 993 Gene3D Ribonuclease Inhibitor 312 501 IPR032675 -
Ssu8g1799 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 963 IPR044974 GO:0006952
Ssu8g1799 993 SUPERFAMILY "Winged helix" DNA-binding domain 27 132 IPR036390 -
Ssu8g1799 993 SUPERFAMILY L domain-like 116 494 - -
Ssu8g1799 993 Gene3D Ribonuclease Inhibitor 146 311 IPR032675 -
Ssu8g1799 993 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1799 Ssu-Chr8 46358163 46362116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1799 38 394 WRKY Transcription Factor Family AT4G12020 39.737 5.59e-60 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1799 - - ccaj:109810288 1642.86