Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1777 ATGGATTTCTGCGTCAAGCAAAAGGAAGGAGAGGAAGAACCTTACATAATGGAAGAAGACGACAACGACGACGATGACGAAGAGGAACAAGTATGGGACGATTGGCAAggagaggaagaggatgaagagCGAGAATCAGAATTCCTCTGTCTCTTCTGTGATTCCCACTACAGTTCGTGCGGTTCCTTGTTCGACCATTGCGCCTCCCTTCACCACTTCGATTTCCACGCAATCAGAACAACTCTTAACTTGGATTTCTATGCCTCTTTTAAGCTCATTAACTTCATCCGCTCTCAGGTGGCAGAGAACAGATGTTGGAGTTGTGGATTGACGTGCCAGTGTAACCGTGACTTGCAGGATCATTTGCATGATGTAATTGACTTTAATGATATAAAGACTCTGTGGACTGATGATAGGTATCTACGACCTTTCATGCAAGATGATTCACTGTTGTACAGTTTTGGTGAATGTGACGAAGATGGTGAAGATGAGCAAGTTACACCAATTGATGAAGATCTTATAAAGGATTTGATGAACATTGAAGAGAGTTTCTGTAACAATCAAGATGCTGCGAAAAAAGTGGAagttgatgatgacaaacatgaTGCTTGTAGAAGAAAAGAGATTGTTTCTGTTTCTAATGATCACTTGAACAGGGCTAGTTCTTCAAACAAGGAACTTATTAATGGTGAGGACTCAAGAGGACATGTTTTGTGCAGTGATAAGGATCTAGAAGAAGGGCATTTGATGGCTAATTCTCAAAATCACATTGCAAAGAATCATATTAAGAAGGTTAATGAAAGTTATTTTGGGTCTTACAGTTCATTCGGTATCCATCAAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAGGCAATTTTGAAGAATCCCTCCCTACTAAATGGTGCTGTGGTTATGGACGTAGGTTGTGGAACCGGAATCCTCAGccTATTTGCAGCAAAAGCAGGGGCTTCGAGGGTTGTTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGgtTGCAAAAGATAATGGTCTTTTGCTAAGTAAAAGCCAAAGTGGAGTTGATGGCCTCCAAAAGGGAGTCATAGAAGTGGTTCATGGCATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCACAGTGTTGATGTATTGCTAAGTGAATGGATGGGTTATTGCTTGCTGTATGAGTCCATGCTTGGTTCAGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCTGTTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCATTTTGGGAAAATGTGTGTAATTTTGACATGTCGTACATTGGGAAAGAGCTTGTGATAGATGCTGCACGAATTCCTATAGTTGATGTTGTGGAATCTCAAGATTTAATTACCAGTTCTGTGATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTGCTTCAGGGAACAATGTGACccatttaaattctaaaacatgCTGCTGGTGTTATGGCGTTGTCCTATGGTTTGAGACTGGATTTACAAGCAGATTCTGCCAAGAAACACCAGCTGTGTTATCAACATCCCCTTACACGCCAAAAACACATTGGTCACAAACAATCTTAACCTTTAGAGAACCTATTGCAATGGgatttggaaaagaaaatggaGGTAATAAACCGGAAGCAATTGGCACTGACGTGTATCCTGCTGTGAAGATTGATTTACGTGTCAGCATTGTTCGCTCTACTGAGCATCGCAACATTGACATTTCCTTAGAAGCTGCTGGTGTTGGTCCTGATGATCAGAAACGCAGTTGGCCTGCACAGCTTTTTAGTCTGCAGTAG 1929 0.4044 MDFCVKQKEGEEEPYIMEEDDNDDDDEEEQVWDDWQGEEEDEERESEFLCLFCDSHYSSCGSLFDHCASLHHFDFHAIRTTLNLDFYASFKLINFIRSQVAENRCWSCGLTCQCNRDLQDHLHDVIDFNDIKTLWTDDRYLRPFMQDDSLLYSFGECDEDGEDEQVTPIDEDLIKDLMNIEESFCNNQDAAKKVEVDDDKHDACRRKEIVSVSNDHLNRASSSNKELINGEDSRGHVLCSDKDLEEGHLMANSQNHIAKNHIKKVNESYFGSYSSFGIHQEMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAKAGASRVVAVEASAKMAAVASQVAKDNGLLLSKSQSGVDGLQKGVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAVLPDTATIFVAGFGKGATSLPFWENVCNFDMSYIGKELVIDAARIPIVDVVESQDLITSSVILQSFDLATMKPNEVDFTATATLELKPSASGNNVTHLNSKTCCWCYGVVLWFETGFTSRFCQETPAVLSTSPYTPKTHWSQTILTFREPIAMGFGKENGGNKPEAIGTDVYPAVKIDLRVSIVRSTEHRNIDISLEAAGVGPDDQKRSWPAQLFSLQ 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1777 642 CDD AdoMet_MTases 308 426 - -
Ssu8g1777 642 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 21 640 - -
Ssu8g1777 642 MobiDBLite consensus disorder prediction 1 38 - -
Ssu8g1777 642 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 640 IPR025799 GO:0016274|GO:0018216
Ssu8g1777 642 Gene3D Vaccinia Virus protein VP39 258 427 IPR029063 -
Ssu8g1777 642 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 272 581 IPR029063 -
Ssu8g1777 642 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 266 599 IPR025799 GO:0016274|GO:0018216
Ssu8g1777 642 MobiDBLite consensus disorder prediction 14 38 - -
Ssu8g1777 642 Pfam Methyltransferase domain 308 423 IPR041698 -
Ssu8g1777 642 Gene3D - 429 636 - -
Ssu8g1777 642 SUPERFAMILY beta-beta-alpha zinc fingers 28 167 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1777 Ssu-Chr8 45310634 45315044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1777 22 641 C2H2 Transcription Factor Family AT3G12270 54.389 0.0 660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1777 8 45310634 45315044 Ssu8g1777 8 45310634 45315044 ECH