Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1732 ATGCCGGATGTTCAAGTCCTTGTTAATGATTTTGTGAATCTGCTTAAGAAACGTAAAATTGAAGGGTCTCAGGCCACGGCAAAGCAGACAGCAGAGTTACTCCGGTCTGTGATTTCGCAGCAGCGAGTGCCACACACAAACCAGGCCACAGCTCTGATTAATGCAGTAAGGGCTGTGGGGGAGCAGATTATTGATGCTAATCCTATTGAGTTAGCTGTGGGAAATATCGTGAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCGACAGCTGCTATGGCTGGTTTGGGGATGTCTGCTGCAAGTGATGATGAGGATGATGTGGAGCGAGATGATCATCCTGTTCTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGTACCTTACGTCCACCATCATTGCAAACTCTTCTAGAGGATGTGACTGATTCAGCTGCTGTTCCACCAACACCTTCCTCGGGGGGTGACTCTGAAGGGAAAAGTAAATCCGTTGAAAAGGGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCACTTGCCATGAACAAATAGCAGAGCAGGCAGTAGAGCATATTCATCAAAATGAGGTAATATTAACGCTAGGCAGTTCAAAAACAGTGTTGGAGTTTCTTTGTGCtgcaaaagagaaaaagagatcaTTTAAGGTCGTTGTCGCAGAAGGTGCCCCAAGGTATCAGGGACATCTCCTTGCAAAACCATTGGCTGCTAGAGGTTTACAGACCACAGTAATAGCTGATTCTGCAACTTTTGCTATGATTTCCCGAGTGAATATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGGGGAGTTATTGCCCCTATAGGGTTACATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGTAGTCACAAGTTGTGCCCTTTGTATCCACACAATCCTCAAGTCCTACTGAATGAGCTGAGATCCCCATCTGAGCTACTTGACTTTGGGGAATTCTCAGATTTGATGGACTCTGCAAGTGGTGCTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAAACCTTGTTAGTCTCTTTATTACTGACACTGGAGGGCATAACCCGTCATATATGTACCGACTTATAGCTGATTACTACTCTGCCGATGATTTGGTAGTGAAACAAAGACCCACTACAGGGAGTTGA 1248 0.4455 MPDVQVLVNDFVNLLKKRKIEGSQATAKQTAELLRSVISQQRVPHTNQATALINAVRAVGEQIIDANPIELAVGNIVRRVLHIIREEDLSLATAAMAGLGMSAASDDEDDVERDDHPVLSAAAVAAAARSTLRPPSLQTLLEDVTDSAAVPPTPSSGGDSEGKSKSVEKGSRGRKLKHDVIEAVNELIQDITTCHEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVVVAEGAPRYQGHLLAKPLAARGLQTTVIADSATFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAAQRHAVPFVVLAGSHKLCPLYPHNPQVLLNELRSPSELLDFGEFSDLMDSASGAGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTTGS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1732 415 PANTHER BNAA01G32370D PROTEIN 55 407 - -
Ssu8g1732 415 PANTHER BNAA01G32370D PROTEIN 8 54 - -
Ssu8g1732 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Ssu8g1732 415 Gene3D - 194 399 IPR042529 -
Ssu8g1732 415 MobiDBLite consensus disorder prediction 143 161 - -
Ssu8g1732 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 407 - -
Ssu8g1732 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 8 54 - -
Ssu8g1732 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 404 IPR037171 -
Ssu8g1732 415 MobiDBLite consensus disorder prediction 143 175 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1732 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 80.440 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1732 K03754 - gmx:100807877 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1732 8 43141463 43147178 Ssu8g1732 8 43141463 43147178 ECH