Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1706 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGATAAGAGGTTGGCAAACCTAAAGCTATCTTCATCTCAACACCAAGATGGCAAAAGTAGAGGAGCTGatatgaagaagaaaatgaaaaattcaagGTTAATAAAGCTTTCTGATCTTGAGGCTCTTcagtcatcatcatcatcaccttCAAGAAGAAGCTTCCCTCAACCAGGAAAGCCACCCCCTCTTTATGTTCCAACAACTGCAGCATCAGCATCAGCATCACCACAGAAGCAACAACCTTTGTTCCAAGCAACAGATGGTTCACCCAATTACATGAAGCCAACAAGCAGTTCACATGCAAAAAAGGAGCTTTTCCCGGTAAGCCACAGGAACACTCAATCTTGTTCTGATTTTAAGAATCTTCCAAGAAAATTTTCCAGTGATTCCAAAGCTGCCTGTGTTAAGAAACCTGCAAAAGCCTTGACAAGATCATCTAGTTTGAGTTTGGTGAGAACATTGACAAAAACCACTAGTTTCAAGGCTTCTAGAGCTTGTTCTAGAAAATCCACCAGGGCTGTTATGTGTGCAGATATGAGTGCACCACAGAGAGGCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTGCATACCTCATGCTTAACCCTGGGGGAACTGAGTCAGAGGGAACTTCAGTCATGAAGGTTTGCCCTTACACATATTGCTCTCTTAATGGTCATCATCATGATGATTTGCCACCATTGAAGAGCTTCATGTCAGCAAGGAGGCGCCTTTTGAAGACGCAGAAGCGTGCAAAGCTTGAAGCTCTTAGTCCTCGGAGACTGAAGATTCCCCTTGAGACAGAAAAAGAGGATTCTGATGTAGAGCAGGATGTTTTTGATGCAAAACCTGCTTGTGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCCAATGAAAAGGATGCAAAACCAACAGGAGCAGAAGAAATGGGGAAAATAGATTTTCTCAAAGAGATTAAGGATCATGAAGATAACAGGTCCACAATTGAGGATAATGGCATAGCAGCAAGTGAGAAGGGTGTCATGCAAGTCATTACTCCAAGAATTATTGGTAATGGTATTCCTTCTCCCCTTATATCTGAGACTGATCTTGAGGAGGATTTGAAAAAATCCTTTGATGATGTTGCAATTGAAGTGGATATCAAAGGAAGCTTTCTCCAAGAACAAAATGCAGAAGATGCAGATGAAGATCACCAACCTATTGTCTGGTCTCATGAAGAAATGTGTATGGAAAGCTGCTGCAGTGATGGGGAACAATACAAGGGGGATGTTGACATGGATGATTCTGATTCCAAAACCTATGATATGGAGTGGGAGGAGGAGCGATTGAACGGATTCAATCACGAAGAGGATGCAGATTCTTCTGTGTACACAGAGGAGGACAATGACTCAAAAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTGTTAGTGACATGGTTAGATGATATCCTTGGTGCCTATTATGAGGACTTCCTGGTTGCTGAAACACACAAAGAAACCAAATCAGAAGAAAGCACCTGCTTTGAAGAACAACCTAATGGCATTAGTTCTGTCCTTGAAGACATAAGTGAAAGCACTGAAACTCAAGAAATTGAGTACTCCTTCACAGGTATGGGTTGTGACCAATCTTCTTTTACAGAGGAAATATTTGAGTACCTGACAAATGCAGAAGATAATGGTGGAGAAAATGAAAAGCATGTGGATGATGAGGCCAGTTGCAACAGAAAGGCACTTGATGAAGAGACAATTGACAATACTCAATATGAGAAGGTGAGTGAAACTTGCAAAATTGATGAGACAAGTGAAGATGGATACTCAAGCAGCCTGGGGAACAATGAAGAGAGCAATAAAGGGGACAGCCAAATTGACTTGTTTGATGTTTCTGAAGAGAGTAACATAGCTGCTCCAGGCCAGGATTTTTTGGAAAAAGACCAAGGCAAGGCTAAAAGGTTCCAAAGCACAAGTTGCATAGGTGAAGAGGAAAACACTGGCAAGAATTGGAAAGTTGCAATTAGGAGAAAGAGGGGtgttgaagatgatgatgaaatGAGAAAGTTCAACCCAAAAGAGCCAAATTTTCTGCCCTTGGTTCCTGAACCAGAGCCAGAAAAGGTTGACCTGAGGCACCAAATGATGGATGGGAGAAAGAATGCAGAGGAATGGATGCTTGATTGTGCACTCAGACAAGTTGTGACCAAACTTGCTCCAGCCAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTCATGCCAGCACCCAAATGTGAAACCCAAGTGAGAAACAATTCAGCATTTGGTCATGCAGGGAGAATTCAAGCTTGTAGCTGA 2406 0.4115 MVQRKVPSKLGIQAEHVKSDKRLANLKLSSSQHQDGKSRGADMKKKMKNSRLIKLSDLEALQSSSSSPSRRSFPQPGKPPPLYVPTTAASASASPQKQQPLFQATDGSPNYMKPTSSSHAKKELFPVSHRNTQSCSDFKNLPRKFSSDSKAACVKKPAKALTRSSSLSLVRTLTKTTSFKASRACSRKSTRAVMCADMSAPQRGTCSSTLKDSKFPAYLMLNPGGTESEGTSVMKVCPYTYCSLNGHHHDDLPPLKSFMSARRRLLKTQKRAKLEALSPRRLKIPLETEKEDSDVEQDVFDAKPACDEIGIDIFIEIYANEKDAKPTGAEEMGKIDFLKEIKDHEDNRSTIEDNGIAASEKGVMQVITPRIIGNGIPSPLISETDLEEDLKKSFDDVAIEVDIKGSFLQEQNAEDADEDHQPIVWSHEEMCMESCCSDGEQYKGDVDMDDSDSKTYDMEWEEERLNGFNHEEDADSSVYTEEDNDSKVESSSESSHDVLVTWLDDILGAYYEDFLVAETHKETKSEESTCFEEQPNGISSVLEDISESTETQEIEYSFTGMGCDQSSFTEEIFEYLTNAEDNGGENEKHVDDEASCNRKALDEETIDNTQYEKVSETCKIDETSEDGYSSSLGNNEESNKGDSQIDLFDVSEESNIAAPGQDFLEKDQGKAKRFQSTSCIGEEENTGKNWKVAIRRKRGVEDDDEMRKFNPKEPNFLPLVPEPEPEKVDLRHQMMDGRKNAEEWMLDCALRQVVTKLAPARKKKVALLVEAFETVMPAPKCETQVRNNSAFGHAGRIQACS 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1706 801 MobiDBLite consensus disorder prediction 56 72 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 464 492 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 464 495 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 87 117 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 621 643 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 1 133 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 37 53 - -
Ssu8g1706 801 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 801 IPR044681 GO:0005516
Ssu8g1706 801 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 801 - -
Ssu8g1706 801 MobiDBLite consensus disorder prediction 624 641 - -
Ssu8g1706 801 Pfam Plant calmodulin-binding domain 682 777 IPR012417 GO:0005516
Ssu8g1706 801 SMART CaM_binding_2 666 777 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1706 Ssu-Chr8 41807888 41810293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1706 482 801 Calmodulin-binding Proteins AT2G38800 29.261 1.64e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1706 - - gmx:102660315 1207.59