Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1702 atgggTTCTATTTGGGAACAGAATTCCCCTGACTATGCTACAGAGGACAACAATGCATGCATCTCTGCACTGCAGCATTGCTTTGGTCCAATATATTCTGCAGTATTGAAAACAGCCCTTGAACTCAACGTGTTTGAGATCATAGCAAAGGCATCCCCACTTGGTGTCTCAGCATCTGATGTTGCGTCTCAACTTCCAACTCAACATCCAGAATTGCCTCGCAGGCTTGACCGCATGCTGTGTCTACTAGCAAGTCACTCTCTTCTTACTTGTTCCATTCGCACAAATGAAGTTGGTGTCCCGGAAAGGTTTTACCAGCTATCACTTGCTGGTAAATACTTCGTCAAAGATGACAATAAGGGCTCTTTAGCTTTCCTATCAGCTCTTCTGAGTCACCGAGTAATCGTGGATGTCTTCCTCAATTTTAAGGAGATACTTCTGGACTATGACAAGGGATTATTCCAGAAAGTTCATGGAGTGCCAATTTATGAAGGCTTGCAGTCAGATCCGGCATTGAACAATGTTTTTAATGAAGCAATGGCTAATCTGGGCATAATCGAGATGAAGAAATTACTTGAAATATATGGAGGATTTGAAGAAATATCATTGCTAGTTGATGTGGGCGGTGGCATTGGCCATAATTTGAATATGATAATCACCAAGTATCCTTCTATAAAGGGTATTAATTTTGATCTGCCCCATGTGATACAAAATGCTCCAACTTATCCAGGGATAAAGCAACTTGAAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCTATAATATTGAAGGCCGTATTGCACAATTGGTCcgatgaaaaatgtttaaaaattttgagtaattGCTACAAAGCTTTGCCACAAAATGGTAAGGTAATCGTTGTGGATATCATAGTGCCTGAAGCAATTCACTCTACAGAAGCAGATAAAATGGTTACTGGCTTTGACAACCTCATGTTTCTGGATGATGGGATAGAAAGAACCGAGAAAGAATTTGAGAATTTATGCAAACGCTCAggattttctaattttcaagTTGCTGGTCGGGCCATCTCTGCTCTAGGAGTGATAGAACTTCGTAAGTGA 1089 0.3921 MGSIWEQNSPDYATEDNNACISALQHCFGPIYSAVLKTALELNVFEIIAKASPLGVSASDVASQLPTQHPELPRRLDRMLCLLASHSLLTCSIRTNEVGVPERFYQLSLAGKYFVKDDNKGSLAFLSALLSHRVIVDVFLNFKEILLDYDKGLFQKVHGVPIYEGLQSDPALNNVFNEAMANLGIIEMKKLLEIYGGFEEISLLVDVGGGIGHNLNMIITKYPSIKGINFDLPHVIQNAPTYPGIKQLEGDMFESVPKGDAIILKAVLHNWSDEKCLKILSNCYKALPQNGKVIVVDIIVPEAIHSTEADKMVTGFDNLMFLDDGIERTEKEFENLCKRSGFSNFQVAGRAISALGVIELRK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1702 362 PIRSF O-mtase 3 362 IPR016461 GO:0008168
Ssu8g1702 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 348 IPR029063 -
Ssu8g1702 362 Gene3D Vaccinia Virus protein VP39 173 348 IPR029063 -
Ssu8g1702 362 SUPERFAMILY "Winged helix" DNA-binding domain 15 118 IPR036390 -
Ssu8g1702 362 PANTHER O-METHYLTRANSFERASE 16 362 IPR016461 GO:0008168
Ssu8g1702 362 Pfam Dimerisation domain 35 84 IPR012967 GO:0046983
Ssu8g1702 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 362 IPR016461 GO:0008168
Ssu8g1702 362 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 16 362 - -
Ssu8g1702 362 Pfam O-methyltransferase domain 152 343 IPR001077 GO:0008171
Ssu8g1702 362 Gene3D - 31 191 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1702 Ssu-Chr8 41604646 41606676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1702 1 362 Monolignol Biosynthesis Gene Families AT5G54160 45.902 4.16e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1702 - - cam:101492092 501.516