Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1660 ATGCATGGCACTCTGTTTAGTGGCACTAACCGCAGCCTCATTACGCTAGGTGCTAACCGTAGCCTCATTGTGCTAAGCGCTAGACCTCTAGCGAATGAGGTGATAGGGTCAAACAAGAACAGCATAAAGAAGGTGATTGAGTACAAGTTCGACGAGGACAACAACAAGGTCAAGATCACCACCATTGCATGCACCCGCAAGCTCGCCAACGCACGTCTCAGCAAACGCACCGTCGAGCGCAGCTCTTGGACCAAGTTTGGCAACACCGTCCATGAGGATGTCAGCAACCACCTCACTATGGTCTCCACTGAAGAGATCCTCCTTGAATGCCCCTAG 336 0.5179 MHGTLFSGTNRSLITLGANRSLIVLSARPLANEVIGSNKNSIKKVIEYKFDEDNNKVKITTIACTRKLANARLSKRTVERSSWTKFGNTVHEDVSNHLTMVSTEEILLECP 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1660 111 Pfam Eukaryotic translation initiation factor 3 subunit G 34 109 IPR024675 -
Ssu8g1660 111 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 32 111 - -
Ssu8g1660 111 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 32 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1660 Ssu-Chr8 39303412 39305767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1660 33 111 Eukaryotic Initiation Factors Gene Family AT3G11400 59.494 1.38e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1660 K03248 - gmx:100818725 119.783