Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1641 ATGCTATCTTCAAATGTTGTTCCATCATCATCCCCTGTCACTTTCACCAAACCCAATCCCCATTTCTTCATTAATGCATCTCCCAATCTCAGGCCAAATCTTCTCACCAGGTTTCAGGCCCAACACAGACCCACTCCTCACCTTCATGAATCACCTCTCAAAAGTTCCAAACTCTCTTTCAGGCCAACCTCTCAGATCCAACATTCCCTCGCAAAGTTAGGCTCTTTCAACAGATTCCTCCCACACCCTTTTGAGCTCTCATCAAAACCTAGGCACCAAATCGTTAAAGCCGCATCTGAAGCCAATCCTGAAGGAGAAAGTGTAGCTCCCACTAATCCCAAACCCAAGAATCTCAAACTTGCTCTGGTGTTTGGGCTGTGGTACTTCCAAAACATTGTGTTCAACATTTACAACAAGAAAGTTTTAAACATATTTCCTTTCCCATGGCTTCTTGCCTCTTTCCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTACTTTGGTCCTTAAAGCTCCAACCTTgtccaaaaatatcaaaaccttTCATCATTGCTCTCCTTGGGCCTGCTTTGTTCCACACAATAGGCCACATATCAGCCTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTCACTCATGTCATCAAATCTGCAGAACCAGTTTTCTCTGTCATGTTTTCTTCTGTTCTTGGTGATAAGTACCCCATTGAGGTTTGGCTCTCAATTCTGCCCATTGTGCTTGGTTGTTCTCTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCCCTTATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAAAAAAGTTTACAGAATTTCAAGGAAGTTGATGGCTTGAACTTGTATGGCTGGATTACTATAGCTTCATTGCTCTACCTGTTTCCAGTGGCTATTTTTGTAGAAGGGTCTCAGTGGATCCCGGGGTATTACAAGGCAATTGAAACAATTGGGAAAACATCCACATTTTATATTTGGGTGTTGCTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCACTGGATGAAATTAGCCCACTGACTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTATATCTTCAGTTTTGGTGTTCAGGAATCCGGTTAGACCTCTTAATGCCCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTGTATTCACAGGCAAcatccaaaaagaaagaaaagaaaattgaagggGAAAAGAGTAgttga 1278 0.41 MLSSNVVPSSSPVTFTKPNPHFFINASPNLRPNLLTRFQAQHRPTPHLHESPLKSSKLSFRPTSQIQHSLAKLGSFNRFLPHPFELSSKPRHQIVKAASEANPEGESVAPTNPKPKNLKLALVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVMFSSVLGDKYPIEVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKKSLQNFKEVDGLNLYGWITIASLLYLFPVAIFVEGSQWIPGYYKAIETIGKTSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIISSVLVFRNPVRPLNALGSAIAILGTFLYSQATSKKKEKKIEGEKSS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1641 425 PANTHER SOLUTE CARRIER FAMILY 35 39 421 - -
Ssu8g1641 425 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 39 421 - -
Ssu8g1641 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 301 411 - -
Ssu8g1641 425 Pfam Triose-phosphate Transporter family 118 408 IPR004853 -
Ssu8g1641 425 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 118 418 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1641 Ssu-Chr8 37410597 37411874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1641 24 423 Antiporters AT5G17630 70.504 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1641 K15283 - gmx:100101869 736.873