Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1593 ATGTTGCTCCATCTCGGGAGGGTCCCAGTTCTCGTGATCTCATCAGCCGATGCCGCACGTCCGGTAATGAAAACCCACGACCGTGTCTTCGCAGACAGGCCCCATAGTAAGATGTCCGACATCCTCTTATACGGTTCCAAGGATGTTTCCGCGGCACCGTATGGAGAGTACTGGAGGCAAATAAGGAGCATCTCCGTCTTGCACCTTCTTAGCACCAAAAGGGTTCAATCATTCCGTGCGGTTAGAGAAGAGGAAATTGAAATAATGATGGAAAACATAAGGCACTCTTGTTCTTCTAATTTGCCTGTGAACTTGAGTGAGGTGTTCTCGACAATCACCAACAATATTATTTGTCGGGTTGCTCTGGGGAGAAAATATGGGGGAGAAAGTGGGAGGGTGTTCAAGAAGTTGTTGGGGGAGTTTACGGAGTTGCTTGGGGCTTTTGTTGTTGGGGACTATGTGCCTTGGCTTGAGTGCTTCACCCGGGTTTCTGGATTGTATGGTAGAGCAAACAAAGTGGCTAAACGGTTTGACGAGTTTTTGGATGAAGTAATTGAAGAGCATGTAAATCGTCATGAAGGAGCCAACAAGGAGCATAGTAATTTTGTGGAAGTTTTGCTTTGGATCCAAAGGACAAACGCAGTTGGCTACCCCATTGACAGAACTGTCATAAAGGCTTTGgataTGTTTGCTGCAGGTACGGACACTACTTCCACCGTCCTAGAATGGACAATGACAGAACTCTTAGGGCATCCGATTGTGATGAAAAAGCTGCAAGATGAAAGTAGGAGTGTGGCTGGTGATAGAAAGCACATAACTGAAGAGGATTTGGATCACATGCAATACTTAAAGGCAGTGATCAAAGAAATTCTTCGCTTACATCCTCCAATCCCATTATTGGTCCCACGACAGAGCATGCAAGACATCAAATTGAATGGTTACCACATTGAAGCTGGCACACGAGTAATTATCAATGCTTGGGCTATTGCAAGAGATCCTAAGTATTGGGATCAACCTGAAGAGTTCAAACCTGAGAGGTTCTTAAACAATTCAATAGATGTGAAAGGGAATGATTTTCAATTGATCCCATTTGGAGCAGGGAGGAGGGGGTGCCCAGGAACAATGTTTGCTATGCTTGTTAATGAGCTTGCACTAGCAAACCTCATCCATCAATTCGACTGGTCATTACCATGTGGGGACAACACCCTCGACATGTCCGAAACAATTGGCTTAACCATGCATAGAAAGAGTCCTCTCATGGCGGTTGTAGCCCCAAACAAGAAGTAA 1287 0.4522 MLLHLGRVPVLVISSADAARPVMKTHDRVFADRPHSKMSDILLYGSKDVSAAPYGEYWRQIRSISVLHLLSTKRVQSFRAVREEEIEIMMENIRHSCSSNLPVNLSEVFSTITNNIICRVALGRKYGGESGRVFKKLLGEFTELLGAFVVGDYVPWLECFTRVSGLYGRANKVAKRFDEFLDEVIEEHVNRHEGANKEHSNFVEVLLWIQRTNAVGYPIDRTVIKALDMFAAGTDTTSTVLEWTMTELLGHPIVMKKLQDESRSVAGDRKHITEEDLDHMQYLKAVIKEILRLHPPIPLLVPRQSMQDIKLNGYHIEAGTRVIINAWAIARDPKYWDQPEEFKPERFLNNSIDVKGNDFQLIPFGAGRRGCPGTMFAMLVNELALANLIHQFDWSLPCGDNTLDMSETIGLTMHRKSPLMAVVAPNKK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1593 428 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS P450 superfamily signature 232 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS P450 superfamily signature 362 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 SUPERFAMILY Cytochrome P450 2 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PANTHER CYTOCHROME P450 71B11-RELATED 1 426 - -
Ssu8g1593 428 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 364 373 IPR017972 GO:0005506|GO:0016705
Ssu8g1593 428 Gene3D Cytochrome P450 1 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 Pfam Cytochrome P450 3 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 325 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 241 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 361 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 284 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 371 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 112 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PRINTS E-class P450 group I signature 221 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1593 428 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1593 Ssu-Chr8 35130293 35133541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1593 1 424 Cytochrome P450 AT3G48270 53.147 4.04e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1593 - - mtr:MTR_4g104540 605.52