Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1532 ATGGTCGCCGCCGAAGCCGACGCCGCTCCGTCGCGCCAGCTGTCGCAGAAGGAGGCGGACATCCAGATGATGCTGGCCGCCGACGTTCACCTCGGCACCAAAAACTGCGACTTCCAAATGGAACGCTATGCCTTCAAGCGCCGCACCGATGGTATATACATTATTAACCTTGGCAAGACATGGGAGAAGCTCCAGCTTGCTGCTAGGATTATTGTTGCGATTGAAAACCCTCAGGATATCATTGTTCAGTCTGCCAGACCTTACGGTCAGAGGGCAGTTCTTAAGTTTGCTCAGTACACTGGTGCTCATGCGATTGCGGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCTTACAATGAGCCTCGTCTTCTAATTCTAACCGATCCAAGGACAGATCATCAGCCTATCAAGGAAGGTGCTCTTGGAAATATACCAACTATTGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGACATCGGGATTCCTGCCAATAATAAGGGGAAGCACAGCATTGGTTGTCTCTTTTGGCTATTAGCTAGGATGGTACTGCAGATGCGGGGTACTATTCGTCCTGGGCATAAGTGGGATGTAATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAAGAGGAAGCACCACCTGCCCAAGATTTTACCATTTCAGACTTCAATGCTGCTGGCATTGGCAGCTTCCCTGCTGATGGCCAATGGCCTGCTGCAATCGAACAACCCTGGACTGAACAAGCTCCTCAACCAATCCCAGCAGTTCCTACTAACTGGACCCCAGAAGCAACTGCTACAGGAGATTGGGGTGAGTCTGTTCCAGCTCCAGCTCCAGATCCAGAAGTTGCTGTGCCTGCAGCCCAAACTGTTACTGCTACTGGCTGGGACTAG 930 0.5032 MVAAEADAAPSRQLSQKEADIQMMLAADVHLGTKNCDFQMERYAFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEAKQQEEEEAPPAQDFTISDFNAAGIGSFPADGQWPAAIEQPWTEQAPQPIPAVPTNWTPEATATGDWGESVPAPAPDPEVAVPAAQTVTATGWD 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1532 309 MobiDBLite consensus disorder prediction 261 309 - -
Ssu8g1532 309 CDD RPS2 24 190 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 ProSitePatterns Ribosomal protein S2 signature 2. 125 149 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PANTHER 40S RIBOSOMAL PROTEIN SA 11 300 - -
Ssu8g1532 309 TIGRFAM uS2_euk_arch: ribosomal protein uS2 16 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ssu8g1532 309 SUPERFAMILY Ribosomal protein S2 16 206 IPR023591 -
Ssu8g1532 309 MobiDBLite consensus disorder prediction 264 278 - -
Ssu8g1532 309 Gene3D - 20 225 - -
Ssu8g1532 309 Pfam Ribosomal protein S2 24 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PRINTS Ribosomal protein S2 signature 51 60 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PRINTS Ribosomal protein S2 signature 142 153 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PRINTS Ribosomal protein S2 signature 163 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PRINTS Ribosomal protein S2 signature 125 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PRINTS Ribosomal protein S2 signature 100 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ssu8g1532 309 PANTHER 40S RIBOSOMAL PROTEIN SA 11 300 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ssu8g1532 309 Hamap 40S ribosomal protein SA [rps-0]. 8 252 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1532 Ssu-Chr8 31854795 31857414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1532 2 282 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 72.242 1.33e-149 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1532 K02998 - gmx:100818292 548.125