Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1517 ATGAGTTGGAACTACGGTGCCGTAAAGCAACAGATCAGTTTGCTGGGTCAGTCATCTTCAGATGAACTCAATCACATACGCCAAGCTGCGGGCTTTCTGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGATTATCTCCAGAAGTCATTAGCAGAATGAGAGTGCTTATGACAGAAGACTCAATAAACATACACAATAACTCATTCCTTTCGGAGGTGGATTCTAGCATACCATTCTTAATGGAGGAGATTTTCCGGTCAATGAGTGACATCCGCCTATCAGATATGGATGTGGATCCACCGCCAATCCTCAGGCAAAGCAAACATCATTTGGTGAAGCCTTCTCTCCGTATGAGTGTCTTCATCTTTGAGAACAGTCTTAGCCCCCCTAGTCATGTTGCCACCACCAAGCGTATTGCATTGTTAGTGGTTGTTCATAAAGGCAGAGATGTTAAAGCATGTGAAGTGATGCACATTATGGCAATAAAAGAAGAGGGTGTGCATAGCATGTGA 549 0.4335 MSWNYGAVKQQISLLGQSSSDELNHIRQAAGFLVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVLMTEDSINIHNNSFLSEVDSSIPFLMEEIFRSMSDIRLSDMDVDPPPILRQSKHHLVKPSLRMSVFIFENSLSPPSHVATTKRIALLVVVHKGRDVKACEVMHIMAIKEEGVHSM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1517 182 PANTHER OS01G0584200 PROTEIN 17 120 - -
Ssu8g1517 182 PANTHER MYOSIN 17 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1517 Ssu-Chr8 31414370 31419041 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1517 17 128 Myosins gene family AT2G31900 53.788 2.69e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1517 K10357 - gmx:100786418 172.94