Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1504 ATGAGGCTCCACtaccttttccttcttttggtCACTTTGGAGCTGAGCACCATTTATGGTCTTTCAACACAAGGAACAGTGCTCAAGAAATCATTCAAGTCCTTACCCCCGGAGGCCTTGCTGTCCATTGGTCACTATCAGACAACATGCCCGGATGCTGAAGGCATCATTTCACGAAAGGTTGCTGCTTGGGTTAAGAAGGACCCCACATTGGCCCCTGCCATCATCCGCCTCCATTTCCATGACTGTGCCATTAGAGGATGCGATGGATCAATTTTGCTTAACCATCCGGGGAGTGAGAGGACTGCTTTTGAGAGTAGAACCCTGAGAGGCTTCCAATTGATTGATGTTATCAAGGGTGAGTTAGAAAGGAGGTGTCCAAGAAAAGTCTCTTGTGCTGACATTCTCACTGCTGCTGCAAGAGATGCCACCCTTTTGGCTGGAGGACCATTCTGGGAAGTCCCCTTTGGCCGCAAAGATGGCAGGGTTTCCTTAGCCAGAGAGGCCAATTTGGTTCCCCAAGGCCATGAAAACATCACAGCTCTTGTTGCATTCTTTCAAGAAAGAGGGTTGGACATGCTTGATTTGGTCACTCTCTCAGGCTCTCACACAATTGGGAGGAGCACTTGCTATTCTTTCATGGATAGGCTTTACAACTTCAATGGGACTGGAAAGCCTGACCCCTCACTCAATGTCTATTACTTGAAGTTGTTGAGGAAAAGGTGTACAAGGGAGTTGAATTTGGTGCACCTTGATGTCATAACCCCAAGGACTTTTGACACAACCTATTACGCAAACCTTATCAGGAAGGTGGGGTTGCTGTCGACGGACCAGTCACTCTTTTCAGATGCAAGGACAGCTCCTTTTGTTGAAGCATTTGCAACCCAACCTTTCCTTTTCACTAGCCAGTTTTCAGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTTCTGACTAGGCCTAATGAAGGTGAAATCAGAGTTAATTGCAATTATGTCAATACTGTCTAA 1008 0.4583 MRLHYLFLLLVTLELSTIYGLSTQGTVLKKSFKSLPPEALLSIGHYQTTCPDAEGIISRKVAAWVKKDPTLAPAIIRLHFHDCAIRGCDGSILLNHPGSERTAFESRTLRGFQLIDVIKGELERRCPRKVSCADILTAAARDATLLAGGPFWEVPFGRKDGRVSLAREANLVPQGHENITALVAFFQERGLDMLDLVTLSGSHTIGRSTCYSFMDRLYNFNGTGKPDPSLNVYYLKLLRKRCTRELNLVHLDVITPRTFDTTYYANLIRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPNEGEIRVNCNYVNTV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1504 335 Gene3D - 44 333 - -
Ssu8g1504 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Ssu8g1504 335 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Ssu8g1504 335 Pfam Peroxidase 59 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 SUPERFAMILY Heme-dependent peroxidases 41 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PANTHER PEROXIDASE 30 332 - -
Ssu8g1504 335 Gene3D Peroxidase, domain 2 173 311 - -
Ssu8g1504 335 CDD secretory_peroxidase 41 332 IPR033905 GO:0004601|GO:0042744
Ssu8g1504 335 PANTHER PEROXIDASE 25-RELATED 30 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 ProSiteProfiles Plant heme peroxidase family profile. 40 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu8g1504 335 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1504 Ssu-Chr8 30826967 30828694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1504 33 334 Peroxidase AT1G30870 51.148 1.92e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1504 K00430 - gmx:100792775 568.54