Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1485 ATGATGAACTTCCAAGCTTGTTCAATCACCATCTCAAAGCTGTTCTTCTGTGTTTGTGTCTTTTTTTCACCAACCGTGGCCTTAGGAGATTGTACATGTGACACAGAAGTGACCAAAAAGAGTGACCCAAGTGAGGTCCTCCACTACAAAATTGGCTCAATTGCTTCTGTGCTTGTTGCTGGGGCTCTTGGGGTGAGTCTCCCATTGTTGAGCAAGAGAATCCCAACCTTGAATCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCTGCAGGGGTGATTCTGGCAACTGGGTTTATCCACATACTTCCAGAGGCATTTGCGAGCTTGACTTCACCCTGCCTAAAGGAAAATCCATGGGGCAAATTTCCCTTCACTGGATTTGTTGCCATGTTGTCCTCTATAGGGACCTTAATGGTGGACTCATTTGCCACAGGGTTTTATCATAGGCAACATTTTAATCCCTCAAAGCAAGTTCCTGCTGATGAAGAAATGGGAGATGAACATGCTGGTCACATACATGTTCATACACATGCCACACACGGTCATGCTCATGGATCAGCTGTCTCCTCTGAGGGTTCAATTACATCTGAATTAATTAGGCAGCGCATCATATCACAAGTGTTGGAGATAGGAATAGTGGTCCATTCAGTGATCATTGGAATATCACTGGGCACTGCAGGGAGCATTGATACCATAAAGCCTCTCCTCGCTGCCCTGTCTTTCCATCAATTTTTTGAGGGGATGGGACTTGGAGGTTGCATATCTCAGGCAAAGTTCGAGTCCAAGTCTACGGCAATTATGGCGACCTTTTTCTCCCTAACAACCCCAGTTGGCATAGCAATTGGAATGGGAGTGTCAAGTGTGTACAAAGAGAATAGCCCAACTGCTTTAACTGTTGAAGGGGTTTTCAATTCTGCTTCTGCTGGAATTTTGATTTACATGGCATTGGTTGATCTGTTAGCAGCGGATTTCATGAACCCAAGGTTGCAGAAAAATTTGAAGCTCCAACTAGGGGCAAATATCTCACTTCTTTTAGGTGCAGGTTGCATGTCTCTATTGGCCAAATGGGCTTAA 1080 0.4463 MMNFQACSITISKLFFCVCVFFSPTVALGDCTCDTEVTKKSDPSEVLHYKIGSIASVLVAGALGVSLPLLSKRIPTLNPKNDIFFMVKAFAAGVILATGFIHILPEAFASLTSPCLKENPWGKFPFTGFVAMLSSIGTLMVDSFATGFYHRQHFNPSKQVPADEEMGDEHAGHIHVHTHATHGHAHGSAVSSEGSITSELIRQRIISQVLEIGIVVHSVIIGISLGTAGSIDTIKPLLAALSFHQFFEGMGLGGCISQAKFESKSTAIMATFFSLTTPVGIAIGMGVSSVYKENSPTALTVEGVFNSASAGILIYMALVDLLAADFMNPRLQKNLKLQLGANISLLLGAGCMSLLAKWA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1485 359 PANTHER ZINC/IRON TRANSPORTER 16 359 - -
Ssu8g1485 359 PANTHER METAL TRANSPORT PROTEIN 16 359 - -
Ssu8g1485 359 Pfam ZIP Zinc transporter 48 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu8g1485 359 TIGRFAM zip: ZIP zinc/iron transport family 36 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1485 Ssu-Chr8 30030134 30032073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1485 30 359 Inorganic Solute Cotransporters AT3G12750 66.172 4.30e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1485 K14709 - gmx:100805124 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1485 8 30030134 30032073 Ssu8g1485 8 30030134 30032073 ECH