Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1464 ATGCAGAAACATCAATACAATTCCATAGAACCTAGAAATGAGGAATTCCATTCCGCATCGCAGTTGGTCCCGCAAGACCTTCGTGATGGCATGCATGCACGGCCTCTGGCATTTAATATGTCAGAAAATAAACCTGTACTTAATTACTCCATACAGACAGGTGAGGAATTTGCTCTTGAGTTTATGAGAGATAGGGTGAATCTCAGGAAGCCTTCCTTTCCAAATGTTGTGAGTGATCCCAATTATTCAACAGGTTATATGGAATTGAAAGGCATTTTGGGCCATACAGGATCTGAGAGTGGATCAGATATTTCTGTGCTCACAAAGGTTGAAAAGGGTCCAAAAGAGTTTGACAGAAGGAACCCTTCTCAACAGCAGGACAGAAGTAATTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGACAATTACCGAGTCCTTCATGGTACTGCCTCTTCTGGTGCTTCTGAAAGTGCATCAATGAAGATGAAGGTTCTATGCAGCTTTGGGGGTCGAATATTGCCACGGCCTAGTGATGGAAAACTTAGATATGTTGGGGGTGAAACACGTATTATTAGTATAAGAAGGGACATACGTTTTCAGGAGCTTATGCAGAAAACATTATCAATCTATAATGAAGCTCATTTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAGGCAGAAGAGGATCACCAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGGATGATACTCAGTTTGGTCTAGGTAGCATTGATGGTGATTCTGAAATCCAGTATGTAGTTGCTGTCAACGGCATGGACATGGGTTCAAGAAGCAACTCAATCCTTCATGGTGAAAGCGGCTCTACTAATAACATACATGAATTGAATGGACAAAATAATGAGAGAGAGACCAATAGAGTTCTGATAGACTCATTTGGTGTTAGCCGTTCTTCCTTGACTGACAATGTTAAATCATCATTGACTATTCAGTCTTCACAACCAATGCTTCCAACCTCCTCTAATGCTTATGAAACCCATCCATTGTTTTATGATGACCAGGTCATTCACCATGGGGAAGCTAGTCAATATCCACTACAGCATGGTCTTGATCCTTCTAACAACTCTGCTCACAATCTTGGAGAGGTTCCAGTTTCTATGCCTACTCATGGTCTTGTTAATCAAGGAATCATGAATGATGGGCAAGCATCCAGTGAGTTGCAGGTACAAATTTCAGATATGCCAGCTTCACTGGTAAAAAGAAAGGGTGATAATTTCATTCATACAGGCAGTGACCCAGGGAAAGTTTTCCCCTTGGAAGCACCATATCCTATTCCTTTGCAGCCATTTGAGGGCAATTTGCATGGTAATTTATCAGAGGCAACAGTTACAGCTGCTATATCAGAAGGGCACCATCCTGCACTGCCATCAAAGAACAAGGGTAAGCACCAGCAGTCTGAAGATACCTCTTCATTAATTAGTAGTATGAATCCCACAGAGACTCCTAAGTCTGGTGAAGATGACATCTATGCTACATCACCTGATGCATTCAGCCGTGCGCATGTTGATGCTGAGTCCAATGTGATTGATTTCAGCTGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAACAGGCAGATTTGCTAAACCGATCTACAAAGTCAGATGATGCTCATGGTTCTCACTTGCTCATGTCAGATTTGCTTTCTGACTTCAACCAGAAGAATTCAGTTACAGAATCCAGTGATACGTTGCACAATGGGAATATGTCAAATCTGAACATTGTGTCCAGCTCAGCAACAAAGCCCTTGCATGCAGATGGCCATACCATTGATGATGGATTTGCCCTGCTGCAGACACACAAACGGTTGCCTGATACAACAACAAGTAGGGTGAATTCAAAGTTATCACAGCTTGTGGATTCTGAGTTGAAGCAAGTGTTAGCAGATAATAAAGTTTCTACAGTGTTAGCAGATAATAAAGTTTCTACAAATGAGGATCAGGTCCTTAGTTCTGAACATGAAACCAATTGCTCCAAAGACAACCATAGTATTCTCTTAGTTGATGAAGCCAAAGGTACTGAACCTCTTGCATTTCATCAGGTTCCTTCTGTTGAACACAAACAGAATCTTGCCTCTAAACTTCCAGACCTCAATTTGGCTGAGGTTTCTACCAGGGGATCTGATAAAGATACTAAGGTCCAAGCTCAGCCTTTTCCTTTAACTGGAAACAAAGGCCAAGATGTTTCTCAAGATTTTCCCCCAGAAGCTAGATCCAGACCTACTCAGGGCGACATTCTGATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAGAGCAATACTTTCTGAAGATTCCTCAAGCATTGGTCCATTACCAACAGATAAAGTAGGTTTGAGCTCACACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTGGCCCAAGAGGGGTTTGATAATGTTTCTCTAATTGATCAGGATAATCTCGGTTTTTTGTCTGCTGTGAGAAAAGCACAAGAGGGGGATAGTAAATCTCAGCAATCTGCTCCTGTACCAGCAGATGGTATTTTGGCAGGACACAAGGAATCCCACCTAAATTTTGGTGAAGGAAATCAGAAAAATGTACCTGTAATAACTAAAACAGAAGCAACTTTCTTTCACCAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGaacatggatgccataatggAAAACATAAGACCACAGGAGTCTGAATACCAGGATGGCACAAATGAAACAAGGAATGTGGGTGTAGCAGGGGATTTTGACACCAGTACTGTGCAGTTTATAAAGAATGAAGATCTTGAAGAACTGCGAGAGCTGGGTTCTGGTACCTTTGGGACTGTGTACCATGGAAAATGGAGGGGATCAGATGTtgcaattaaaagaataaagaaaagctGCTTCGCTGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTTACCGAGTACATGGTGGACGGTTCTCTTAGGAATGTTTTGCTTCGTAAGGATAGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGACCAATATGCAAGGTTGGCGATTTTGGCCTATCAAAGATTAAGCGAAATACCCTGGTGTCTGGTGGTGTCCGTGGAACTCTACCATGGATGGCACCAGAGCTGCTAAATGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTCTTATGGGAGATTCTTACTGGTGATGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGCATTGTGAATAACACATTAAGACCTACAATCCCCAGTTATTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGTCAGGCCATCCTTCACAGAAATTGCTCGCCGCTTGCGTGTGATGTCCGCAGCTGCTAGTCAGATCAAAGGACAAGGCCACAAGGCATCTAAATGA 3807 0.4169 MQKHQYNSIEPRNEEFHSASQLVPQDLRDGMHARPLAFNMSENKPVLNYSIQTGEEFALEFMRDRVNLRKPSFPNVVSDPNYSTGYMELKGILGHTGSESGSDISVLTKVEKGPKEFDRRNPSQQQDRSNYGSARSIPRTSSNQDNYRVLHGTASSGASESASMKMKVLCSFGGRILPRPSDGKLRYVGGETRIISIRRDIRFQELMQKTLSIYNEAHLIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGRRGSPKLRMFLFSINDLDDTQFGLGSIDGDSEIQYVVAVNGMDMGSRSNSILHGESGSTNNIHELNGQNNERETNRVLIDSFGVSRSSLTDNVKSSLTIQSSQPMLPTSSNAYETHPLFYDDQVIHHGEASQYPLQHGLDPSNNSAHNLGEVPVSMPTHGLVNQGIMNDGQASSELQVQISDMPASLVKRKGDNFIHTGSDPGKVFPLEAPYPIPLQPFEGNLHGNLSEATVTAAISEGHHPALPSKNKGKHQQSEDTSSLISSMNPTETPKSGEDDIYATSPDAFSRAHVDAESNVIDFSCLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDFNQKNSVTESSDTLHNGNMSNLNIVSSSATKPLHADGHTIDDGFALLQTHKRLPDTTTSRVNSKLSQLVDSELKQVLADNKVSTVLADNKVSTNEDQVLSSEHETNCSKDNHSILLVDEAKGTEPLAFHQVPSVEHKQNLASKLPDLNLAEVSTRGSDKDTKVQAQPFPLTGNKGQDVSQDFPPEARSRPTQGDILIDIEDRFPRDFLYDMFSRAILSEDSSSIGPLPTDKVGLSSHMDNHEPKRWSYFQNLAQEGFDNVSLIDQDNLGFLSAVRKAQEGDSKSQQSAPVPADGILAGHKESHLNFGEGNQKNVPVITKTEATFFHQKYEHSQLKGNENKNMDAIMENIRPQESEYQDGTNETRNVGVAGDFDTSTVQFIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRNVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGDEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPAVRPSFTEIARRLRVMSAAASQIKGQGHKASK 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1464 1268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1111 1123 IPR008271 GO:0004672|GO:0006468
Ssu8g1464 1268 Gene3D Phosphorylase Kinase; domain 1 972 1072 - -
Ssu8g1464 1268 Gene3D - 184 267 - -
Ssu8g1464 1268 SUPERFAMILY CAD & PB1 domains 181 273 - -
Ssu8g1464 1268 ProSiteProfiles Protein kinase domain profile. 986 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1464 1268 MobiDBLite consensus disorder prediction 493 533 - -
Ssu8g1464 1268 Pfam Protein tyrosine and serine/threonine kinase 987 1249 IPR001245 GO:0004672|GO:0006468
Ssu8g1464 1268 SUPERFAMILY Protein kinase-like (PK-like) 976 1248 IPR011009 -
Ssu8g1464 1268 Gene3D Transferase(Phosphotransferase) domain 1 1073 1267 - -
Ssu8g1464 1268 MobiDBLite consensus disorder prediction 508 524 - -
Ssu8g1464 1268 Pfam PB1 domain 182 265 IPR000270 GO:0005515
Ssu8g1464 1268 SMART PB1_new 180 267 IPR000270 GO:0005515
Ssu8g1464 1268 CDD PB1_UP2 169 265 - -
Ssu8g1464 1268 CDD STKc_MAP3K-like 992 1249 - -
Ssu8g1464 1268 ProSitePatterns Protein kinases ATP-binding region signature. 992 1017 IPR017441 GO:0005524
Ssu8g1464 1268 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 79 1268 - -
Ssu8g1464 1268 MobiDBLite consensus disorder prediction 112 148 - -
Ssu8g1464 1268 MobiDBLite consensus disorder prediction 760 779 - -
Ssu8g1464 1268 MobiDBLite consensus disorder prediction 124 148 - -
Ssu8g1464 1268 PRINTS Tyrosine kinase catalytic domain signature 1105 1123 IPR001245 GO:0004672|GO:0006468
Ssu8g1464 1268 PRINTS Tyrosine kinase catalytic domain signature 1176 1198 IPR001245 GO:0004672|GO:0006468
Ssu8g1464 1268 PRINTS Tyrosine kinase catalytic domain signature 1068 1081 IPR001245 GO:0004672|GO:0006468
Ssu8g1464 1268 PRINTS Tyrosine kinase catalytic domain signature 1220 1242 IPR001245 GO:0004672|GO:0006468
Ssu8g1464 1268 MobiDBLite consensus disorder prediction 755 791 - -
Ssu8g1464 1268 PANTHER SERINE-THREONINE PROTEIN KINASE 79 1268 - -
Ssu8g1464 1268 SMART serkin_6 986 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1464 Ssu-Chr8 29417846 29424039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1464 39 631 MAP Kinase Kinase Kinase AT1G16270 38.450 1.80e-102 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ssu8g1464 PK_Tyr_Ser-Thr 8.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1464 - - gmx:100799118 2202.56