Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1463 ATGGAACAATCAAGATTCCAAAACACGATTCTATGCAGTAACATGGAACCTAGAAATGATGAATACCACCAGCCTGGGTCACAGTCAGTGATGCAGGACCATCTAGATGGCACACATACCAGTAGAAGACCAGCTGACCTCAATACATCAGAAGTTAAACCTGTACTTAATTACTCCATACAGACAGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATATCAGGAAGCCTGTATTATCAAATGTCGGTGATTCCAATTATACCCCAGGTTATATGGAACTGAAAGGCATTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCTGATATTTCTATGCTCTCAATGGTTGACAAATATCCAAAAGAGTTTGATAGAATGAATACATCGTTACCTGGAAATGGAAGCAACTATGGGTCGATTCAATCAATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTGTGCCTAGGTATGGCTCTTTTGGAGGTTATGATAGATCAATGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTGCGAATAAGAAAGGACATATCTTGGCACGAGCTTATGCAGAAAGCATTACAAATCTATAATCAGGTTCATGCAATCAAGTATCAGCTTCCTGGCGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTACAGAATATGATGGAGGAGTGTAATCATCTAGAAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCACTGAGTGATTTGGAGGATGCTCAGTTTGGTCTCAGCAATGTGGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAAAAACACAACCATGATTGGTGTCAGCTTTTCTGCAAATGATATAAATGAATTGGACAGGCAAAGTATTGACAGGGAGACTAGTAGAGTTTGTGTAGAATCTATTGCACAAGGCAATACTCCCCTGACTAACAATTTTGACTCATCATTGGCTACTCAGTCTTCACCACTTGTGCTGCCAACTTCCTCAAATTCTTATGAAAAATATCCATTGTTTTACGGTGATCAAATGATGCACCATGGGGAACCTAGTGATCAGTATCTTATTAATCATGGCCTTAATCCTTGTCCTAAACCTGTTATTGGAGATAATCCTATCATTATGCCTCCTCATATGCTCGTTAATCAACAAGTGATTTTGAATGAAGGCCTTCCACCTCGTGGAATACAAGTACAAAATTCAGAAATACCAGCAACATTGGCACACAAGATGGTTGATAGTTCAATTCAACAAGGAAGTGACCCTGGGAAAGTTTTATTAGAATTACCATCTCCAGCTCCTGCACAACTGCTTAATGGttacatgaaaaataattttcctgAAGCATCAGTTGTAGTTACTGCACCAGAGGGGCATTCATTGCATCCAGCAAAAATGGACAAGCATCAGGATTATGAAGAAACTTCTTCTACATCTAGCAGTGTATTTGGCCCTGTTTATGTTGATTCCCACTCCAATGCAGCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCTAAAAGAGTTTACTATTCGGAGAGAATTCCACGGGAACAAGTAGAGTTGCTGAATCGGTCCTCAAAATCAGATGATACACACAGTTCTCAGTTTCATGTTTCAGATTTACTTTCTGACGTCAACCTGCCAGATTCAGTTACAGAATCTGGTGACAAGTTACATGATGGAAATCTGCCTAATTTAACTGAGGAATTAGGCATCACAGAAAAGCCCTTGTATGCAGATGGCTATGCCATTGATAATGGGGCTGTCAAACATCAAATATACAAACAGCTTCATGATGCAAGCAGTCAGATGAAATCAAAGCTAACTGACCATGTGAATCCTGAGTTGAAGCAGGTATTATCAGACAATGAAGGAAACAAAGATGTGTTAAATAAGGATAATGTTGTTGGGTTGGAAATggaaatttatagtaaaaataactataacaaaCCCCTGATTGATGAGACAAAAGCCGCTAAATCAGACTTGCCTAATTTGCACCAGGTTTCTTCTGGTAAGCATCTTGATGATCCAGCAACCAATCTTTCAGAGGTTGATTGGGGTGATACCTCTGTGAAGGAGTCTAATGACGATATTAATGTACAAGCCTTACCTGTTTCTTTAAATGGGAATACAACTATAAAAGATGATTCTGAAGAATTTCCTTCAAATGTTGTTTCCAAACAAGCACAAGGTGACATCCTTATTGATATTAATGATCGGTTCCCCCGTGAATTTTTCACTGATATATTCTCTAAAGCAGTACTTGAAGAAGATCCCTCTGGTCTGCATCCATTAACCTCAGATGGAGTGGGCTTAAGTGTAAACATGGAAAATCGTGAACCTAAACGATGGtcgtattttcaaaaattggctCAAGAAGGGATTGATAATGTGTCTCTTATTGACCAGGATCATCTTGGTTTTTCACCTGCAATAGGAAAAGTGGTTGGAGATAATATGGCTCAACGTGTTAGACCTTTAACAACTGATGAAAATTCTCTGAACCATGCAGAGTCCCACCTcgattttgaagaaaatataagagACCTACATGGAAGGATTGGAGCAGAAACCACTGTTCTGAAGTCAAATTATGATCATTCCCAAGTGAACAACACTGAAAGTATGCAATTTGATGCTATGATGGAAAACATAAGAGCACAAGAATCAGAACATGAGGTTGGGAAGTTTGAAAAAAGGAATAGCAATCTACCTCCTCCTGATCCTTCTTTAGGAGAGTTTGATACAAGTACCTTGCAGGTCATAATGAATGATGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCcattaaaagaataaagaaaatctGCTTCACTGGCCGATCATCTGAGCAAGAGAGACTgACTGTAGAATTCTGGCGAGAAGCTGAAATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACGATGGCGACTGTTACAGAGTACATGGTGAATGGTTCTCTTAGGCATGTATTACTTTGTAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTACACTTTGACTTAAAATGTGACAATTTGTTGGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGCTTGTCAAAAATTAAACGCAATACCTTGGTTTCTGGTGGTGTGCGGGGTACTCTTCCTTGGATGGCACCAGAGCTACTGAACGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAgGTGGGATTGTGAACAACACATTAAGGCCAACAATTCCAAACCATTGTGATCCTGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCCAATCCTGCAGCTAGGCCATCCTTCACAGAAATAGCCAGTCGATTGCGCGTAATGTCTGCAGCAGCTAGCCAAACCAAAACACAGGGCCACAAGGCATCTAAATGA 3762 0.3947 MEQSRFQNTILCSNMEPRNDEYHQPGSQSVMQDHLDGTHTSRRPADLNTSEVKPVLNYSIQTGEEFALEFMRDRVNIRKPVLSNVGDSNYTPGYMELKGILGISHAGSESGSDISMLSMVDKYPKEFDRMNTSLPGNGSNYGSIQSMPRTSLNQDNRQFVPRYGSFGGYDRSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWHELMQKALQIYNQVHAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRMFLFSLSDLEDAQFGLSNVGDDSEIQYVVAVNGMDLGSRKNTTMIGVSFSANDINELDRQSIDRETSRVCVESIAQGNTPLTNNFDSSLATQSSPLVLPTSSNSYEKYPLFYGDQMMHHGEPSDQYLINHGLNPCPKPVIGDNPIIMPPHMLVNQQVILNEGLPPRGIQVQNSEIPATLAHKMVDSSIQQGSDPGKVLLELPSPAPAQLLNGYMKNNFPEASVVVTAPEGHSLHPAKMDKHQDYEETSSTSSSVFGPVYVDSHSNAADLSSLHPPPLPKRVYYSERIPREQVELLNRSSKSDDTHSSQFHVSDLLSDVNLPDSVTESGDKLHDGNLPNLTEELGITEKPLYADGYAIDNGAVKHQIYKQLHDASSQMKSKLTDHVNPELKQVLSDNEGNKDVLNKDNVVGLEMEIYSKNNYNKPLIDETKAAKSDLPNLHQVSSGKHLDDPATNLSEVDWGDTSVKESNDDINVQALPVSLNGNTTIKDDSEEFPSNVVSKQAQGDILIDINDRFPREFFTDIFSKAVLEEDPSGLHPLTSDGVGLSVNMENREPKRWSYFQKLAQEGIDNVSLIDQDHLGFSPAIGKVVGDNMAQRVRPLTTDENSLNHAESHLDFEENIRDLHGRIGAETTVLKSNYDHSQVNNTESMQFDAMMENIRAQESEHEVGKFEKRNSNLPPPDPSLGEFDTSTLQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVNGSLRHVLLCKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNHCDPEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQTKTQGHKASK 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1463 1253 ProSitePatterns Protein kinases ATP-binding region signature. 977 1002 IPR017441 GO:0005524
Ssu8g1463 1253 MobiDBLite consensus disorder prediction 15 45 - -
Ssu8g1463 1253 MobiDBLite consensus disorder prediction 15 35 - -
Ssu8g1463 1253 CDD STKc_MAP3K-like 977 1234 - -
Ssu8g1463 1253 Pfam Protein tyrosine and serine/threonine kinase 972 1234 IPR001245 GO:0004672|GO:0006468
Ssu8g1463 1253 SUPERFAMILY CAD & PB1 domains 191 278 - -
Ssu8g1463 1253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1096 1108 IPR008271 GO:0004672|GO:0006468
Ssu8g1463 1253 SMART PB1_new 189 276 IPR000270 GO:0005515
Ssu8g1463 1253 Gene3D - 193 275 - -
Ssu8g1463 1253 SUPERFAMILY Protein kinase-like (PK-like) 957 1233 IPR011009 -
Ssu8g1463 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1253 - -
Ssu8g1463 1253 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 87 1253 - -
Ssu8g1463 1253 Gene3D Phosphorylase Kinase; domain 1 964 1058 - -
Ssu8g1463 1253 Gene3D Transferase(Phosphotransferase) domain 1 1059 1253 - -
Ssu8g1463 1253 ProSiteProfiles Protein kinase domain profile. 971 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1463 1253 SMART serkin_6 971 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu8g1463 1253 CDD PB1_UP2 178 274 - -
Ssu8g1463 1253 Pfam PB1 domain 191 275 IPR000270 GO:0005515
Ssu8g1463 1253 MobiDBLite consensus disorder prediction 502 525 - -
Ssu8g1463 1253 PRINTS Tyrosine kinase catalytic domain signature 1205 1227 IPR001245 GO:0004672|GO:0006468
Ssu8g1463 1253 PRINTS Tyrosine kinase catalytic domain signature 1053 1066 IPR001245 GO:0004672|GO:0006468
Ssu8g1463 1253 PRINTS Tyrosine kinase catalytic domain signature 1090 1108 IPR001245 GO:0004672|GO:0006468
Ssu8g1463 1253 PRINTS Tyrosine kinase catalytic domain signature 1161 1183 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1463 Ssu-Chr8 29407019 29414948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1463 48 582 MAP Kinase Kinase Kinase AT1G16270 38.474 2.19e-95 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ssu8g1463 PK_Tyr_Ser-Thr 4.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1463 - - gmx:100799639 2251.48