Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1462 ATGAACAGGTATGGACCAATCTTCAAGACCAGCTTGGTTGGACGACCAACTGTAGTGTCCACAGACCCGGATTTTAATTACTTCATATTCCAACAGGAGGGACAAATGTTCCAGAGCTGGTACCCAGATACATTCACCGAGATTTTTGGTAGACAAAATTTAGGTTCCTTGCATGGTTTTCTGTTTAAGTACCTTAAGAACATGGTGCTCAATCTGTTTGGCCCTGAGGGCCTCAAAAGGATGCTCTCAGAGGTTGAACAGAAAGCGTGCGCAACACTACAGCAGTGGTCGTGCCAGGAAACTGTTGAGTTGAAGGATGCAACAAAAAGCATGATATTTGATTTGACTGCAAAAAAACTTCTCAGTTGTGAATCGACCGAGACCTTGGAGAATTTAATGGGCAGCTTTGTTGCATTTATAGAAGGACTCATCTCCTTCCCTCTCAACATTCCAGGAACAGCTTATCACAAATGTATGCAGGAAGAACATGAAGCCATCCTCAAACGTCGTGAAGATCCTAACTCCGGAGTCACTTGGCAAGAATACAAATCAATGACATTTACACTTCAGTTCATAAATGAAACCATCAGACTCGCAAATATAGCTCCAGGAATCTTCCGGAAGGCACTACAGGATATTAATTTTGGGGGATACACCATACCAGCAGGCTGGGCAATCATGGTGTGTCCCCCAGCTGTACACTTGAACCCGGCCAAATATCAGGATCCGCTTGCCTTCAACCCATGGAGATGGGAGGGAATGGAAATGAATGCTGCCAGCAAACATTTCATGGCTTTCGGTGGAGGCTTGAGATTTTGTGTTGGGGCAGACTTCGCTAAGGTTCAGATAGCTGTTTTTCTTCATAACTTGGTAACAAAGTACAGGTGGCTACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAGATGGCTTTTACGTCCAGATCATGAAGAAACATCAAAGGAATGCATGA 987 0.4407 MNRYGPIFKTSLVGRPTVVSTDPDFNYFIFQQEGQMFQSWYPDTFTEIFGRQNLGSLHGFLFKYLKNMVLNLFGPEGLKRMLSEVEQKACATLQQWSCQETVELKDATKSMIFDLTAKKLLSCESTETLENLMGSFVAFIEGLISFPLNIPGTAYHKCMQEEHEAILKRREDPNSGVTWQEYKSMTFTLQFINETIRLANIAPGIFRKALQDINFGGYTIPAGWAIMVCPPAVHLNPAKYQDPLAFNPWRWEGMEMNAASKHFMAFGGGLRFCVGADFAKVQIAVFLHNLVTKYRWLPIKGGNIVRTPGLQFPDGFYVQIMKKHQRNA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1462 328 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 3 160 - -
Ssu8g1462 328 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 160 321 - -
Ssu8g1462 328 Pfam Cytochrome P450 156 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PRINTS E-class P450 group I signature 273 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PRINTS E-class P450 group I signature 229 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PRINTS E-class P450 group I signature 263 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PANTHER CYTOCHROME P450 26 3 160 - -
Ssu8g1462 328 SUPERFAMILY Cytochrome P450 2 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 PANTHER CYTOCHROME P450 26 160 321 - -
Ssu8g1462 328 Gene3D Cytochrome P450 173 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 Gene3D Cytochrome P450 1 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu8g1462 328 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 266 275 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1462 Ssu-Chr8 29176115 29180456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1462 157 325 Cytochrome P450 AT1G12740 69.143 1.75e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1462 - - sbi:8054429 321.627