Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1455 ATGGCTTCGACCCTTTTCACAAAGATGCTTTCAGGTCATCGCTTGATTCACTCTTCTTCATTCCTCACTCACCAGCCACGgattctctcttctttattcAGTAAAAGGTTGTTTTGTATACGAGCTGTCCCGGTCCCACCCTATACAGCCCAAAACATCAAAACAACTGGTTGGGCTCCTTGTATGGCTTCTTCTGCAGTTGGAAGAGGAGCTACATATTCAACACAATCTGTATCAACAAATGAGCCAGTTGTTTCTGTAGATTGGCTTTATGATAACCTGAAGGTGCCAGATATCAAGGTACTGGATGCATCGTGGTACATGCCGGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCCCTTTTCTTTGACGTAGATGGAATAGCAGATCGAGCTACAAATTTACCACACATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTTTCTGCTCTTGGCATACAAAACAAAGATGACCTGGTTGTTTATGATGGAAAAGGATTATTTAGTGCAGCCCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGCCTGCCGAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCTAGTGAGGCTATAGAGAAAGTATATCAGGGACAAACAGTTGGTCCACTCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGAACCTTGATCAGGTAAAGAAAAATCTAGAGGACAAAACTCACCAACACATAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGCGCAGGAGCCCCGAAAGGGAATCAGAAGTGGTCATGTACCTGCTAGCAAATGCATCCCTTTTGCCCAGTTGTTAGATAGTTCACAGACCTTGTTACCGACTGATGAGCTGAAGAAGCGATTTGATCAAGAAGGCATCTCCTTGGAAAGCCCAGTTGTAACTTCTTGTGGAACAGGGGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGCATGATGTTGCAGTTTACGATGGATCTTGGACTGAATGGGGAGCACAATCTGATACACCTGTTGAAACTTCGTAA 1140 0.4404 MASTLFTKMLSGHRLIHSSSFLTHQPRILSSLFSKRLFCIRAVPVPPYTAQNIKTTGWAPCMASSAVGRGATYSTQSVSTNEPVVSVDWLYDNLKVPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRATNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQTVGPLTFQTKFQPHLVWNLDQVKKNLEDKTHQHIDARSKPRFDGAAQEPRKGIRSGHVPASKCIPFAQLLDSSQTLLPTDELKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGKHDVAVYDGSWTEWGAQSDTPVETS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1455 379 ProSiteProfiles Rhodanese domain profile. 263 377 IPR001763 -
Ssu8g1455 379 CDD TST_Repeat_2 254 370 - -
Ssu8g1455 379 PANTHER THIOSULFATE SULFERTANSFERASE 65 379 IPR045078 GO:0016783
Ssu8g1455 379 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 256 378 IPR036873 -
Ssu8g1455 379 SMART rhod_4 253 374 IPR001763 -
Ssu8g1455 379 SMART rhod_4 85 209 IPR001763 -
Ssu8g1455 379 ProSitePatterns Rhodanese C-terminal signature. 358 368 IPR001307 GO:0004792
Ssu8g1455 379 Pfam Rhodanese-like domain 86 205 IPR001763 -
Ssu8g1455 379 Pfam Rhodanese-like domain 256 370 IPR001763 -
Ssu8g1455 379 Gene3D - 249 377 IPR036873 -
Ssu8g1455 379 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 65 379 - -
Ssu8g1455 379 CDD TST_Repeat_1 84 207 - -
Ssu8g1455 379 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 214 IPR036873 -
Ssu8g1455 379 ProSitePatterns Rhodanese signature 1. 119 130 IPR001307 GO:0004792
Ssu8g1455 379 Gene3D - 76 219 IPR036873 -
Ssu8g1455 379 ProSiteProfiles Rhodanese domain profile. 95 212 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1455 62 378 Sulfurtransferasese or Rhodanese AT1G79230 79.495 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1455 K01011 - gmx:100798053 722.62