Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1449 atgaacTTGGTGTACCCGTCCGCGCCAGGTGGCATTGACAACCCAATGTTCAACCCTATGGCTCCAGGGGCACCTAGCTTGGTTGGACTTGGATGCTCCAAAATGATTATATGTATTGCTGGCAAGGATATATTCAAGGACATAGGGATTTGGTATTATGAATCTGTGAAGAAAAGTGGGTGGCAAGGGAAACTAGAACTACTTGAAGACAAAGATGAACATCATGTTTATCATTTGTTTAATCTAGAGTCTGAGAATGCTAAGAAATTGAACAAGCGCTTAGTTTCCTTTCTCCAGGAATAG 303 0.4125 MNLVYPSAPGGIDNPMFNPMAPGAPSLVGLGCSKMIICIAGKDIFKDIGIWYYESVKKSGWQGKLELLEDKDEHHVYHLFNLESENAKKLNKRLVSFLQE 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1449 100 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 2 99 - -
Ssu8g1449 100 PANTHER ARYLACETAMIDE DEACETYLASE 2 99 - -
Ssu8g1449 100 Gene3D alpha/beta hydrolase 1 100 IPR029058 -
Ssu8g1449 100 SUPERFAMILY alpha/beta-Hydrolases 5 100 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1449 Ssu-Chr8 28142267 28142569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1449 6 100 Carbohydrate Esterase AT1G19190 35.789 2.19e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1449 - K13258 aprc:113873855 158.303